Xylella taiwanensis: AB672_05125
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Entry
AB672_05125 CDS
T05568
Symbol
sbcB
Name
(GenBank) exonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
xtw
Xylella taiwanensis
Pathway
xtw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xtw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AB672_05125 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xtw03400
]
AB672_05125 (sbcB)
Enzymes [BR:
xtw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
AB672_05125 (sbcB)
DNA repair and recombination proteins [BR:
xtw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
AB672_05125 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AB672_05125 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AB672_05125 (sbcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AXI83363
UniProt:
Z9JL47
LinkDB
All DBs
Position
complement(1218550..1219995)
Genome browser
AA seq
481 aa
AA seq
DB search
MTTSFLFYDLETFGQDPRRTRIAQFAAIRTDPELNVIEEPISFLVTPAADLLPSPHATLI
TGITPQQALREGVSEAEAFAHIATQMTRPQTCSLGYNTLRFDDEFIRYGLFRNFYDPYER
EWRNGNSRWDLLDMLRLMHALRPEGIHWPTREDGATSFKLEHLALANDVREGQAHEALSD
VYATIGMARKFRTAQPRLWDYALKLRDKHFCGKLLDPISMQPALHISQRYPATRQCAAAV
LPLAKHPHINSRIIVFDLSSDIDPLLHLSAEDIADRLYTPAADLPEGEQRVPLKEVHLNK
VPALIAWNHLRASDFTRLGLDPSMLEAKAAQLRACGPDLAEKVRHVFDHTHQASNTVNDA
DTSLYDGFLTEDDRHLLPQLRACPPDGLATFDQRLHDPRLIELLFRYRARNWPDTLSGDE
QARWDTYRRQRLTTATGLSELTIDQFHTQIAELRMTHSQDAAKQILLDQLATWGSDLSRT
L
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccagctttctgttctacgacttagaaaccttcggtcaagacccgcgccgtact
cgcatcgcacagttcgccgcgatacggacagatcccgaattgaacgtcattgaggagccc
atcagttttctcgtcacacccgccgccgacctcctgccctcgccccatgccaccttgatc
accgggatcaccccgcaacaggcactccgcgaaggcgtgagcgaggctgaagccttcgcg
cacatcgccacacagatgacgcgaccacaaacttgctcgctcggctacaacaccctacgt
ttcgacgacgaattcatccgctacggcctattccgtaacttctacgacccatacgaacgc
gaatggcggaatggcaactcacgttgggacctgctggacatgctgcgactgatgcacgcg
ctacgtccagaaggcatccactggccaacacgcgaggacggtgccacctcatttaaactc
gaacatcttgctctggccaacgatgtgcgcgaaggccaggcacacgaagcattgtcggat
gtctatgccaccatcggcatggcgcgcaaattccgtaccgcacagccacgcctctgggat
tacgcgctcaaactgcgcgacaaacacttttgcggcaagctgctcgacccaatctcaatg
caaccagcactgcatatctcacagcgctatccggccacacgacagtgcgccgccgccgtg
ctgccgcttgccaagcacccacacatcaacagccgcatcatcgtcttcgacctgagcagc
gacatagacccactgctacacctatccgcggaagacatcgctgaccgtctgtacacccca
gccgcggatctacccgaaggggaacaacgcgttccactgaaagaagtccacctcaacaaa
gtaccggccctgatcgcctggaaccacctgcgtgcatcagacttcacccgccttggcctc
gacccaagcatgctcgaagccaaagccgcacagctgcgcgcctgcggaccggacttggcc
gaaaaggtccgccacgtcttcgaccacacacaccaagcctccaacaccgtcaacgacgcc
gacacttcactgtacgacggcttcctcaccgaggatgaccgccatctactgccgcagcta
cgcgcctgtccgcctgatggtttggcaacgttcgaccagcgcctgcatgatccacgtcta
atcgagttgctcttccgctaccgcgcgcgtaactggccagacacactgtctggtgacgaa
caggcacgctgggacacgtatcggcgccaacgtctgaccaccgccaccggcctatcggag
ctcaccatcgaccagttccacacccaaatcgccgagttacgcatgactcactcccaggat
gcagccaagcagatcctcttggaccagctcgccacctggggctccgacctgtcccgcacg
ctatga
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