Xanthomonas vasicola pv. vasculorum: C7V42_03255
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Entry
C7V42_03255 CDS
T05388
Name
(GenBank) endonuclease
KO
K05522
endonuclease VIII [EC:3.2.2.-
4.2.99.18
]
Organism
xva
Xanthomonas vasicola pv. vasculorum
Pathway
xva03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C7V42_03255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xva03400
]
C7V42_03255
Enzymes [BR:
xva01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
C7V42_03255
DNA repair and recombination proteins [BR:
xva03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C7V42_03255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
FBP_C
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
AVQ05790
LinkDB
All DBs
Position
712675..713427
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AA seq
250 aa
AA seq
DB search
MPEGPSLVILREDTEAFVGRKILRVSGNSKQDIARLDQQKVLALRSWGKHFLIECANFSV
RIHFLLFGSYRINEDKPNAVPRLCLEFSKGQRLNFYACSVQFIERPLDEVYDWTADVMNP
LWDAAQARRKLRAMPGMLAADALLDQTIFAGVGNIIKNEVLHRIRVHPESTVGALPARKL
GELVTQARDYSFDFYTWKKAFVLKKHYQVHTKNSCPRDGAPLQYRKHLGKAGRRAFFCEV
CQRLYHAKEA
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgccagaaggtccctcacttgtcatcctgcgcgaagacaccgaagcgtttgtcggccgc
aaaatcctgcgcgtgtccggcaacagcaagcaggacatcgcacgtctggatcagcagaaa
gtgctggcgctgcgcagctggggcaaacacttcttgatcgaatgcgcaaacttcagcgtg
cgcatccactttctgttgttcggcagctatcgcattaacgaagacaaacccaacgcggtg
ccgcgcttgtgcctggaattttccaaaggccagcggttgaatttctatgcgtgctcggtg
cagttcatcgagcgcccgctcgacgaggtgtacgactggacggcggacgtgatgaatccg
ctgtgggatgctgcgcaggcacgtcgcaagctacgcgctatgcccggcatgctggccgcc
gatgcattgctcgaccagaccatctttgccggcgtgggtaacatcatcaagaacgaggtg
ctgcaccgcatccgtgtgcatccggagagcacggtgggcgcgttgccggcgcgcaaactg
ggcgaactggtcacccaggcacgtgactacagtttcgatttctacacctggaaaaaagcc
ttcgtgctgaagaagcattaccaggtgcacaccaagaacagctgcccgcgcgatggcgca
ccgttgcagtaccgcaagcacttgggcaaggccgggcgccgcgcatttttctgcgaggtg
tgccagcgcctgtaccacgccaaagaggcgtga
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