Xylanimonas protaetiae: ET471_03080
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Entry
ET471_03080 CDS
T05815
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
xya
Xylanimonas protaetiae
Pathway
xya03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xya00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
ET471_03080
09124 Replication and repair
03420 Nucleotide excision repair
ET471_03080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xya03021
]
ET471_03080
03400 DNA repair and recombination proteins [BR:
xya03400
]
ET471_03080
Enzymes [BR:
xya01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ET471_03080
Transcription machinery [BR:
xya03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
ET471_03080
DNA repair and recombination proteins [BR:
xya03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
ET471_03080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
QAY69151
UniProt:
A0A4V0YFW7
LinkDB
All DBs
Position
698810..700486
Genome browser
AA seq
558 aa
AA seq
DB search
MGDGPLIVQSDKSLLLEVDHPRADECRRAIAPFAELERAPEHVHTYRLTNLGLWNARAAG
HDAEQVVNTLLEFSRYPVPHALLVDVAETMDRYGRLTLHAHPTHGLVLEASDRAVLAEVL
KSRRTSGLLGERIDDQTVVVHPSERGHLKQVLVKLGWPAEDLAGYVDGEKHPIALSHEAT
PIQGGAVKHWEMRPYQAQAVDSFWFGGSGVVVLPCGAGKTIVGAGAMAKSGTTTLILVTN
TVSARQWKDELIRRTTLTEDEIGEYSGTRKEIKPVTIATYQVLTTKRKGVYSHLELLDAR
DWGLIVYDEVHLLPAPIFRMTADLQARRRLGLTATLVREDGREDEVFSLIGPKRYDAPWK
DIEAQGYIAPADCVEVRLTLPESDRMTYAVAEPEDKYRLAATASGKNRVVERIVETHPDD
QVLVIGQYLDQLEELSAHLDAPLITGATTVRERQRLFDAFRSGEVSKLVVSKVANFSIDL
PEASVAIQVSGSFGSRQEEAQRLGRVMRPKSDGRTAHFYAVVARDTVDQDFAAHRQRFLA
EQGYAYRIVDAEDFDPVQ
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacgggcctttgatcgtgcagagcgacaagtcgttgttgctcgaggtcgaccat
ccgcgggccgacgagtgccggcgggccatcgcgcccttcgccgagctcgagcgtgcgccc
gagcacgtgcacacctaccggctcaccaacctgggcctgtggaacgcgcgcgcggccggg
cacgacgccgagcaggtggtcaacaccctcctcgagttctcgcgctacccggtgccgcac
gcgctgctcgtcgacgtcgccgagaccatggaccggtacggccgcctcacgctgcacgcg
cacccgacgcacgggctggtgctggaggcctccgaccgggccgtgctcgccgaggtgctc
aagtcgcgtcgcacgtcgggcctgctgggcgagcggatcgacgaccagaccgtcgtcgtg
cacccctccgagcgcggccatctcaagcaggtgctggtcaagctcggctggcccgcggag
gacctggccgggtacgtcgacggcgagaagcaccccatcgcgctgtcccacgaggccacc
cccatccagggcggagcggtcaagcactgggagatgcggccctaccaggcgcaggccgtc
gactcgttctggttcggcggctccggcgtcgtcgtcctgccgtgcggtgcgggcaagacc
atcgtgggcgccggcgccatggccaagtccggcacgacgacgctcatcctcgtgaccaac
accgtgagcgcgcggcagtggaaggacgagctgatccgccgcaccacgctcaccgaggac
gagatcggcgagtactcgggcacccgcaaggagatcaagcccgtcacgatcgccacctac
caggtgctcaccacgaagcggaagggcgtgtacagccacctcgagctgctcgacgcccgc
gactggggcctcatcgtctacgacgaggtacacctgctgcccgccccgatcttccgcatg
acggcggacctccaggcccgacgacgcctcggcctcaccgcgacgctcgtgcgggaagac
ggccgtgaggacgaggtgttctcgctcatcgggcccaagcggtacgacgccccctggaag
gacatcgaggcgcagggctacatcgcccccgccgactgcgtggaagtgcggctcacgctg
ccggagtcggaccgcatgacgtacgccgtcgcggagcccgaggacaagtaccggctcgcg
gcgacggcgtccggcaagaaccgcgtcgtcgagcgcatcgtggagacgcacccggacgac
caggtgctcgtcatcgggcagtacctcgaccagctcgaggagctgtcggcgcacctcgac
gccccgctcatcacgggggcgacgacggtgcgcgagcggcagcggctgttcgacgcgttc
cgctcgggcgaggtgtcgaagctcgtggtgagcaaggtcgcgaacttctcgatcgatctg
cccgaggcgtcggtcgcgatccaggtctcgggctcgttcgggtcccggcaggaggaggcc
cagcgcctgggccgcgtcatgcgccccaagtccgacggccgcaccgcgcacttctacgcc
gtcgtcgcgcgcgacacggtcgaccaggacttcgccgcccaccgccagcgcttcctggcg
gagcaggggtacgcgtaccggatcgtggacgcggaggacttcgaccccgtgcagtga
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