Xylanimonas protaetiae: ET471_13545
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Entry
ET471_13545 CDS
T05815
Name
(GenBank) rRNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
xya
Xylanimonas protaetiae
Brite
KEGG Orthology (KO) [BR:
xya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xya03009
]
ET471_13545
Enzymes [BR:
xya01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
ET471_13545
Ribosome biogenesis [BR:
xya03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ET471_13545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QAY70921
UniProt:
A0A4V0YGE4
LinkDB
All DBs
Position
2928588..2929319
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AA seq
243 aa
AA seq
DB search
MPDGVRLQKVLADAGYGSRRKAEQLIEEGRVSVDGHIVVELGVRVDPEKSVIHVDGMRVL
LDTSKITVAVNKPAGVISAMSDAQGRPTLADLVRNREERLFHVGRLDLDSEGLILLTNDG
ELGNRLAHPKYEVPKTYLVTAGGGEVYPRIVRQLLEGVDLEDGPARMDKVKVVQALGDVT
MVEVVLHDGRNRIVRRMFDAVERPVERLVRTKIGPIALGDQRPGTNRVLSRTEVGSLMAA
VDL
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgacggcgtccgcctccagaaggtgctcgccgacgccgggtacggctcgcgccgc
aaggccgagcagctcatcgaggagggccgcgtgagcgtcgacgggcacatcgtcgtcgag
ctcggcgtgcgcgtcgaccccgagaagagcgtcatccacgtggacggcatgcgggtgctg
ctcgacacgagcaagatcaccgtggccgtgaacaagcccgccggcgtcatctccgcgatg
agcgacgcgcagggccgccccacgctcgccgacctggtgcgcaaccgcgaggagcgcctc
ttccacgtcggccgcctggacctcgactccgagggcctcatcctcctgaccaacgacggc
gagctcggcaaccgcctcgcgcaccccaagtacgaggtgcccaagacctacctcgtgacc
gccggcggcggcgaggtgtacccgcgcatcgtgcggcagctgctcgagggcgtggacctc
gaggacggccccgcccgcatggacaaggtcaaggtcgtgcaggcgctcggcgacgtcacc
atggtcgaggtcgtgctgcacgacggccgcaaccgcatcgtccgccgcatgttcgacgcc
gtcgagcgtcccgtcgagcgcctcgtgcgcaccaagatcggccccatcgcgctgggcgac
cagcgtcccggcaccaaccgggtgctgagccggaccgaggtcggcagcctcatggccgcc
gtcgacctgtga
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integrated database retrieval system
