Yersinia enterocolitica (type O 5) YE53/03: YE5303_28821
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Entry
YE5303_28821 CDS
T03739
Symbol
speF
Name
(GenBank) ornithine decarboxylase, inducible
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
yee
Yersinia enterocolitica (type O:5) YE53/03
Pathway
yee00330
Arginine and proline metabolism
yee00480
Glutathione metabolism
yee01100
Metabolic pathways
yee01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
yee00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
YE5303_28821 (speF)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
YE5303_28821 (speF)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
YE5303_28821 (speF)
Enzymes [BR:
yee01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
YE5303_28821 (speF)
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
CCQ42193
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All DBs
Position
4279672..4281837
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AA seq
721 aa
AA seq
DB search
MKKLNIAASTSAMPCFESQREVVDVLHTDFTDVAAVVLSVQDINNGVIESIHSLGLDIPI
FAAVCCEEELNTDVLPSLNGVFELCGDNTDFYGKQLESAAEKYEKELLPPFFSTLKKYVE
MGNSTFACPGHQGGQFFRKHPAGRQFFDFYGETIFRSDMCNADVKLGDLLIHEGAPCDAQ
KHAAKVFNADKTYFVLNGTSASNKVATNALLARGDLVLFDRNNHKSNHHGALIQAGATPV
YLETARNPFGFIGGIDAHCFEEKYLREQIRSVAPERANEARPFRLAIIQLGTYDGTIYNA
RQVVDKIGHLCDYILFDSAWVGYEQFIPMMKDCSPLLLELNENDPGIIVTQSVHKQQAGF
SQTSQIHKKDKHIKGQDRYCNHKRFNNAFMLHASTSPFYPLFAALDVNAKMHEGKSGQRM
WLDCVKTGIEARKMILNTCNMIKPFVPVEVDGKPWQEYDTEAMAQDLRFFNFIPGEKWHA
FEGYEASQYFVDPCKLLLTTPGIDTNTGEYTASGIPATILANFLRENGIVPEKCDLNSIL
FLLTPAEDLAKMQHLVAQIARFERFIEEDALLSDVLPTVYRNNETRYKGYTIGKLCQEMH
DLYVSYDVKQLQKEMFRKQYFPKVMMNPQDANIEFVRGHAELVPLCKAEGRIAAEGALPY
PPGVLCVVPGEVWGGAAQRYFLALEESINLLPGFAPELQGVYLQVDEDGWNRAYGYMMKN
K
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattaaatatcgcggcgagtacatctgccatgccttgtttcgaatcacagcgg
gaagttgtagatgttttacacaccgattttactgatgtagctgctgtggtactttctgtt
caagacattaataatggtgtcattgaaagcattcattcattaggtctggatattccaatt
tttgcggctgtctgttgtgaagaagaactgaataccgatgtattaccatctttaaatggg
gtatttgaactgtgcggtgacaatactgacttttacggtaaacaactggaatccgcagct
gaaaaatatgaaaaagagttgctacctccgttcttcagtacattaaaaaaatatgttgag
atggggaattctacttttgcctgtccgggacaccaaggtggtcagttcttccgtaaacat
ccggctggacgtcaattctttgacttctacggtgaaactattttccgttctgatatgtgt
aacgctgacgtcaaattaggcgatttgcttattcatgaaggcgcaccttgtgatgctcaa
aaacatgctgcaaaagtatttaatgccgataaaacctatttcgtactgaacgggacatca
gcttctaataaagtcgccaccaatgccctattagcccgtggtgatctggtactgtttgac
cgtaataaccataaatccaaccatcatggcgcactgattcaagcaggggctacaccggtt
tatctggaaactgcccgtaacccgtttggctttatcggtggtattgatgctcactgtttt
gaagagaaatacctgcgtgaacagatacgtagcgtagccccagaacgtgccaacgaagcg
cgcccattccgcctggcgattatccaattaggcacttatgacggtaccatttataacgct
cgtcaggttgtggataaaatcggccacctttgtgactatattctgttcgactctgcttgg
gtcggttatgagcagtttattcctatgatgaaagattgctcaccattattacttgaactg
aatgaaaacgatccaggtattatcgttacgcaatcagtacataaacaacaagccggtttc
tcgcaaacctcgcaaattcataagaaagataaacatattaaaggccaggatcgttattgt
aaccataagcgttttaataatgcctttatgttgcacgcttccaccagcccattctatcca
ttattcgcagcattagatgttaatgcgaaaatgcatgaagggaaaagtggtcagcgcatg
tggttagattgtgtgaagaccggtattgaagcccgtaaaatgatcttaaatacctgtaat
atgattaaaccttttgtgccggtagaagttgatggtaaaccttggcaagaatatgacacc
gaggctatggctcaagatttacgcttctttaatttcattccaggcgaaaaatggcatgct
tttgaaggttatgaagcatcacaatactttgtcgacccttgtaaattgttattaactaca
ccaggaattgataccaataccggcgaatataccgcttcaggtattccggcaactattctg
gctaacttcctacgtgaaaatggcatcgtgccagaaaaatgtgaccttaactccattctg
ttcttattaacgccagcagaagacttggcgaaaatgcaacatttggtggcacaaattgct
cgttttgaacgtttcattgaagaagatgcattactgagtgatgtattaccaacagtttat
cgtaataacgaaactcgttataaaggctataccatcggtaaattatgtcaggaaatgcat
gacctttatgtcagctacgatgttaaacagctgcaaaaagaaatgttccgcaaacaatat
ttccctaaagttatgatgaatcctcaggatgccaatattgaattcgttcgtggacatgct
gaattagttccattatgtaaagcagaaggccgaattgccgctgaaggcgcacttccttac
ccaccgggagtattgtgtgttgtccctggtgaagtttggggtggtgctgctcaacgttat
ttcctggcacttgaagaaagtattaacctattgccaggctttgcacctgaattacaaggt
gtttatttacaagtcgatgaagacggatggaaccgcgcatacggctatatgatgaaaaac
aagtaa
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