KEGG   Yersinia enterocolitica LC20: LC20_04501Help
Entry
LC20_04501        CDS       T03179                                 

Gene name
ddl
Definition
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
yel  Yersinia enterocolitica LC20
Pathway
yel00473  D-Alanine metabolism
yel00550  Peptidoglycan biosynthesis
yel01100  Metabolic pathways
yel01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:yel00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00473 D-Alanine metabolism
    LC20_04501 (ddl)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    LC20_04501 (ddl)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    LC20_04501 (ddl)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:yel01011]
    LC20_04501 (ddl)
Enzymes [BR:yel01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     LC20_04501 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:yel01011]
 Precursor biosynthesis
  Amino acid ligase
   LC20_04501 (ddl)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N CPSase_L_D2 ATP-grasp_4 ATP-grasp_3 ATP-grasp ATPgrasp_ST RimK TTL ATPgrasp_Ter ATPgrasp_YheCD GARS_A
Motif
Other DBs
NCBI-ProteinID: AHM75754
UniProt: A0A2K7ZLD1
LinkDB All DBs
Position
complement(3912684..3913604)
Genome map
AA seq 306 aa AA seqDB search
MAEKVAVLLGGTSAEREVSLLSGQAVLAGLKEAGIDAYGIDTKDFPVTQLKEQGFDKVFI
ALHGRGGEDGTLQGVLEFLQLPYTGSGVMASALTMDKLRTKLVWQASGLPISPYVALNRQ
QFETLSSEELAACVAKLGLPLIVKPSHEGSSVGMSKVDKASELQEALVEAFRHDTDVLIE
KWLSGPEFTVAILGDEVLPSIRIQVPGVFYDYAAKYLSDETQYFCPSGLSAELEQQLAAL
ALQAYQALGCSGWGRVDVMQDSDGRFYLLEVNTSPGMTSHSLVPMAARQYGLSFSQLVAR
ILTLAD
NT seq 921 nt NT seq  +upstreamnt  +downstreamnt
atggctgagaaagtcgcggtactgctgggtggtacctccgctgaacgtgaagtgtcattg
ctatctggtcaggcagttttagcgggcttgaaagaagcgggtattgatgcatatggcatt
gatactaaagacttcccggtaactcagcttaaagagcaaggttttgataaggtctttatc
gcgctgcatggacgtggtggtgaagacggtacgctgcaaggtgtattggagtttttgcaa
ctgccatataccggtagcggcgtgatggcatcggcgctgacgatggacaaattgcgcacc
aaattggtgtggcaagcttcaggtttgcccatttcgccttatgtcgcgctcaatcgccaa
cagtttgaaacactttcgtcagaggaattggcggcatgtgtcgctaagcttggcctgcca
ttaattgttaagccaagccatgaaggctctagcgttgggatgagtaaggttgataaggcc
agtgagctgcaagaggccctggttgaagctttccgtcatgacactgatgtgctgattgaa
aaatggttgagtgggccggaattcaccgtcgctattttgggtgacgaggttttaccctcg
atccggattcaggtccctggtgtattttatgattatgcagctaaatatttgtctgatgaa
acccagtatttctgcccaagtggcttgagtgctgagttagagcagcagttggcggcattg
gcattgcaagcttatcaagctctaggttgcagtggttggggccgggttgacgtgatgcaa
gacagcgatggccgtttctatctgctggaagtgaatacttccccggggatgaccagccac
agtttagtgccgatggctgcccgccaatatgggttgagtttctcccagttggtggcccga
attctgacgttggctgactga

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