Yersinia enterocolitica LC20: LC20_04734
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Entry
LC20_04734 CDS
T03179
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
yel
Yersinia enterocolitica LC20
Pathway
yel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LC20_04734 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yel03019
]
LC20_04734 (pnp)
03016 Transfer RNA biogenesis [BR:
yel03016
]
LC20_04734 (pnp)
Enzymes [BR:
yel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LC20_04734 (pnp)
Messenger RNA biogenesis [BR:
yel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LC20_04734 (pnp)
Transfer RNA biogenesis [BR:
yel03016
]
Prokaryotic type
tRNA degradation factors
LC20_04734 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_2
KH_2
aRib
UPF0181
Spt6_S1
Motif
Other DBs
NCBI-ProteinID:
AHM75987
UniProt:
A0A7U4GIA3
LinkDB
All DBs
Position
complement(4154211..4156331)
Genome browser
AA seq
706 aa
AA seq
DB search
MLTPIIRKFQYGQHTVTIETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQSFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLTSRLIDRPIRPLFPDSFLNEVQVIATVVSV
NPQVNPDIVALIGASAALSLSGIPFNGPIGAARVGFINDQYVLNPTTDELKESRLDLVVA
GTAAAVLMVESEADILSEDQMLGAVVFGHEQQQVVIENINALVAEAGKPKWDWQPEVVNE
ELHARVAVLAAARLGDAYRITEKQERYEQVDAIKADVTDTLLAQDDTLDAAEIQDILGNV
EKDVVRSRVLRGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQNIDELMGERTDSFLLHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVMAVMPSPSE
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKDEESFVVLSD
ILGDEDHLGDMDFKVAGSRDGITALQMDIKIEGITREIMQVALNQAKGARLHILGVMEQA
ISTPRGDISEFAPRIYTMKINPEKIKDVIGKGGSVIRALTDETGTTIEIEDDGTIKIAAT
DGDKAKHAIRRIEEITAEIEVGRIYAGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVMEVDRQGRIRLSIKEATTPDAEAAAPEAAE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
ttgctgactccgattattcgtaaattccagtacggccaacataccgtcaccattgaaacc
ggtatgatggcacgccaggcaacagctgcagttatggtaagcatggatgacaccgcagta
tttgtgactgttgttggccaaaagaaagccaaaccaggccagagcttcttccctttgact
gttaactatcaggagcgtacttacgctgctggtcgtatcccaggcagcttcttccgtcgc
gaaggccgcccaagtgaaggtgaaacactgacttcacgtctgattgaccgcccgattcgt
ccactgttcccagacagtttcctgaatgaagttcaggttatcgcgaccgttgtttctgtt
aacccacaagttaaccctgatatcgtggcactgattggtgcatcagcggcactgagccta
tcaggtattccattcaacggcccaatcggtgctgctcgcgttggttttatcaacgaccag
tatgtactgaacccaaccactgacgagttgaaagagagccgtctggacttggtcgttgcc
ggtactgctgctgcggtattaatggtcgaatcagaagcagatatcttgtctgaagatcaa
atgttgggcgcggttgtgttcggccacgaacaacagcaagttgtgattgaaaatatcaat
gcactggttgccgaagccggcaaacctaagtgggattggcagccagaagtggttaacgaa
gaactgcatgcgcgtgttgctgtattggctgctgctcgtctgggtgacgcatatcgcatc
actgagaaacaagagcgttacgaacaagttgatgctatcaaagctgatgtcactgacaca
cttttggcgcaagacgataccttagatgctgccgaaattcaggatatcctgggcaacgtt
gagaaagatgtcgttcgtagccgcgtattacgtggcgaaccacgtattgatggccgcgaa
aaagacatgatccgtggcttggatgtgcgtactggcgtcttgccacgtacccatggttct
gcgttgttcacccgtggcgaaactcaggcattggttaccgccacactgggtacagcacgt
gatgcgcaaaatattgatgagctgatgggtgagcgtactgactcattcctgctacactat
aatttccctccatattctgttggtgaaacaggcatggtgggttcaccgaaacgtcgtgag
attggccatggccgtctggcgaaacgcggtgtaatggcagtgatgccaagcccgagcgag
ttcccttacactgtacgtgtggtttctgaaatcaccgagtctaacggttcttcctcaatg
gcctctgtttgtggtgcttctttggccctgatggatgcaggtgtgccgattaaagccgct
gttgctggtatcgccatgggcctggtgaaagacgaagaaagctttgtcgtgctgtctgac
attctaggtgatgaagatcacttgggcgacatggactttaaagtggccggtagccgtgac
ggtatcaccgcactgcaaatggacattaaaattgaaggtatcacccgcgaaatcatgcag
gtggctctgaaccaagctaagggtgcgcgtttgcacattctgggtgttatggaacaggct
atcagcacaccacgcggcgatatctctgagtttgctccacgtatctacaccatgaaaatc
aatcctgagaaaatcaaggatgtgattggtaaaggtggttccgtgattcgtgcgctgaca
gatgaaactggcaccaccattgaaatcgaagacgatggtaccattaagattgcagcaacc
gacggcgataaagcaaaacatgctatccgtcgtattgaagaaattactgctgaaatcgaa
gtgggccgcatctatgcgggtaaagtgactcgtattgttgatttcggtgcctttgttgct
atcggcggcggtaaagaaggtctggtgcatatttctcaaatcgctgacaagcgcgtagag
aaagtgactgactatctgcaaatgggccaagaagtgccagtgaaagtcatggaagttgat
cgccagggccgtattcgcctgagcatcaaagaagctacgactcctgacgcagaagcggcg
gcaccagaagcagcagagtaa
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