Yersinia enterocolitica subsp. enterocolitica 8081 (serotype 0 8): YE0499
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Entry
YE0499 CDS
T00469
Symbol
holC
Name
(GenBank) DNA polymerase III, chi subunit
KO
K02339
DNA polymerase III subunit chi [EC:
2.7.7.7
]
Organism
yen
Yersinia enterocolitica subsp. enterocolitica 8081 (serotype 0:8)
Pathway
yen03030
DNA replication
yen03430
Mismatch repair
yen03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
YE0499 (holC)
03430 Mismatch repair
YE0499 (holC)
03440 Homologous recombination
YE0499 (holC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yen03032
]
YE0499 (holC)
03400 DNA repair and recombination proteins [BR:
yen03400
]
YE0499 (holC)
Enzymes [BR:
yen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
YE0499 (holC)
DNA replication proteins [BR:
yen03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
YE0499 (holC)
DNA repair and recombination proteins [BR:
yen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
YE0499 (holC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_chi
Motif
Other DBs
NCBI-ProteinID:
CAL10619
UniProt:
A1JJ30
LinkDB
All DBs
Position
complement(574532..574981)
Genome browser
AA seq
149 aa
AA seq
DB search
MKNATFYLLEHDTPAGELRAHEALACEIAAERWRAGKRVLIACESQEQAQRLDEALWQRA
PEQFVPHNLAGEGPKYGAPVELAWPERRGNSPRDLLISLLPEFAGFATAFHEVVDFVPYE
ENLKQLARDRYKSYRSVGFHLTTATPPTN
NT seq
450 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacgccacgttttatttgctcgaacacgacacgcccgctggtgagctgcgcgct
catgaggcgttggcctgcgaaattgcggccgagcgttggcgggcaggcaaacgggtactg
atcgcctgtgaaagtcaggaacaggcccagcggctggatgaagcgctatggcaacgggca
cctgagcaatttgttccccataatttggcgggtgaagggccaaagtatggcgcaccagtc
gaactggcttggccggaacgacgtggaaattccccccgcgacctgcttatcagcctgcta
ccagagttcgcaggttttgccaccgctttccatgaagtggtagacttcgttccttacgaa
gaaaatttgaaacagttggcgcgcgaccgatataagtcttatcgcagcgtcggcttccac
ttgaccacggcaacgccgccaactaattga
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