Yersinia enterocolitica 2516-87: CH48_2006
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Entry
CH48_2006 CDS
T03644
Symbol
nfi
Name
(GenBank) endonuclease V
KO
K05982
deoxyribonuclease V [EC:
3.1.21.7
]
Organism
yet
Yersinia enterocolitica 2516-87
Brite
KEGG Orthology (KO) [BR:
yet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yet03400
]
CH48_2006 (nfi)
Enzymes [BR:
yet01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.7 deoxyribonuclease V
CH48_2006 (nfi)
DNA repair and recombination proteins [BR:
yet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CH48_2006 (nfi)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Endonuclease_5
Motif
Other DBs
NCBI-ProteinID:
AJJ29416
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All DBs
Position
2245597..2246301
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AA seq
234 aa
AA seq
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MVDTKALRAEQLQRASEISLQDDIASESVRFIAGADVGFEQQGEVTRAAIAVLRYPSLEL
VEYQVARVATSLPYIPGLLSFREYPALLAAWEQIQQRPQLVFVDGQGIAHPRRLGVASHF
GLLVDVPTIGVAKSRLCGNFEPLGDDNGALQPLVDADEQLGWVWRSKSRCNPLFISPGHR
VSVGSALGWVQHCMAGYRLPEPTRWADAIASNRPQFQRWVRKSPDLLGKHRDMI
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atggtagacaccaaagcgttacgggcagaacagctgcaacgcgcatctgaaattagcctt
caagatgatatcgcaagtgagtcagtgcgctttatcgcgggagcagatgttggttttgag
cagcagggggaagtgacccgtgctgctattgctgttttacgttacccctcgctcgaattg
gtggaatatcaggttgcccgcgtggcaacttcactgccgtatatccccggtttactctct
tttcgtgaatatcctgcattattagctgcttgggagcagatacaacaacgacctcaactg
gtttttgttgatgggcaggggatagcgcaccctcgccgtttaggggttgccagtcatttt
ggcttgctggtagatgtcccgaccattggtgttgctaaaagccgtttatgcgggaatttt
gagccattgggcgacgataacggcgcattgcagcctttggttgatgccgatgagcagcta
ggttgggtatggcgcagcaaaagccgttgtaatccgctatttatttcacccggccaccgg
gtgagtgttggcagcgcattaggatgggttcaacattgcatggcgggttaccgtttgccg
gaaccgacacgttgggccgatgctatcgcgtcaaaccgcccgcaatttcaacggtgggtg
cggaaaagtcctgatttgcttggcaagcatagggatatgatttaa
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