Yersinia enterocolitica WA: CH47_3511
Help
Entry
CH47_3511 CDS
T03643
Symbol
gidA
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
yew
Yersinia enterocolitica WA
Brite
KEGG Orthology (KO) [BR:
yew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
yew03016
]
CH47_3511 (gidA)
03036 Chromosome and associated proteins [BR:
yew03036
]
CH47_3511 (gidA)
Transfer RNA biogenesis [BR:
yew03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
CH47_3511 (gidA)
Prokaryotic type
CH47_3511 (gidA)
Chromosome and associated proteins [BR:
yew03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
CH47_3511 (gidA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C_1st
GIDA_C
FAD_oxidored
FAD_binding_2
HI0933_like
Pyr_redox_2
DAO
AlaDh_PNT_C
Pyr_redox
MarR_2
Thi4
NAD_binding_9
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
AJI84686
LinkDB
All DBs
Position
3820971..3822860
Genome browser
AA seq
629 aa
AA seq
DB search
MFYPDQFDVIIIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLV
KEIDALGGLMAMATDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMI
FQQPVEDLIVENDRVVGAVTKMGLKFRAKAVVLTVGTFLDGKIHIGLENYSGGRAGDPPS
ISLSQRLRELPLRVNRLKTGTPPRIDARTIDFSQLAPQLGDTPIPVFSFLGNASQHPEQM
ACHITYTNEKTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNSHQIFLEPE
GLTSNEIYPNGISTSLPFDVQMQIVRSMKGLENARIVRPGYAIEYDFFDPRDLKPTLESK
YIQGLFFAGQINGTTGYEEAAAQGLLAGLNAGRFANDEDGWSPRRDEAYLGVLVDDLSTL
GTKEPYRMFTSRAEYRLMLREDNADLRLTEMGRKLGLVDDARWAHFSQKIEQIEKERQRL
RDIWVHPHSENVAEINAVLKAPLSKEANGEELLRRPEIDYRLLTTLPSFGPALTDPQAAD
QVEIQVKYEGYIARQQEEIEKQLRNENTLLPADLDYRQVSGLSNEVIAKLNGHKPNSIGQ
ASRISGITPAAISILLVWLKKQGLLRRSA
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgttttatccagatcaatttgacgtcatcatcattggtggtggtcatgccggcacggaa
gctgcaatggcagcggcacgcatgggacgtcagaccttattgctgacgcacaatatcgac
acgttgggacaaatgtcttgtaacccagcgattggcggtattggtaaggggcatttggta
aaagagatcgatgctctgggcgggttaatggcaatggcaactgaccaggccggtattcag
tttaggatactaaacgccagcaaagggccagcggtaagagcaactcgagcccaagccgac
cgtgttctgtatcgccaggctgttcgtaccgcattggaaaaccaacctaacttgatgatt
ttccaacagccggtagaagatctgattgttgaaaacgatcgtgtggtcggtgctgtgacc
aaaatggggttaaaattccgcgctaaggctgtggttttaaccgtcggcactttcctcgat
ggcaaaattcatattggccttgagaactacagcggcggccgtgcaggtgatccgccatcc
atctcgttgtcacaacgcctgcgtgaattaccgctacgggttaatcgccttaaaaccggt
acgccaccgcgtattgatgcacgcactatcgattttagccaattggccccacaactgggc
gatacccccattccggtattctcattcctggggaatgctagccagcatccagaacaaatg
gcgtgtcatatcacctacaccaatgaaaaaacccacgaagtgatccgtaataacctggat
cgcagcccgatgtatgcggggatcattgaggggatcgggccacgctattgcccgtcgatc
gaagacaaagtcatgcgctttgctgatcgtaattcacatcagatcttccttgaacctgaa
ggtctgaccagtaatgagatctacccaaacggtatttctaccagcttgccttttgatgtt
cagatgcagatagtccgctcgatgaaagggctggaaaatgcacgcatcgttcgtcctggt
tatgccattgaatatgatttctttgatcctcgtgatttgaaaccgactctggaaagtaaa
tatatccagggtttgttctttgccgggcaaatcaatggcactactggctatgaagaagct
gcggctcaagggctgcttgcaggcctcaatgctggccgtttcgccaacgatgaagatgga
tggtcacctcgccgcgatgaagcttaccttggcgtgctggtggacgatttaagcaccctc
ggcaccaaagagccgtaccgtatgtttacgtcacgagcggaatatcgtttgatgctgcgt
gaagacaacgcggatctgcgtttgactgaaatgggccgtaagttagggttggtcgatgat
gctcgctgggctcactttagccaaaaaattgagcaaattgaaaaagaacgccaacgcctg
cgtgatatctgggttcatcctcattctgagaacgtagctgaaatcaatgcggtgctgaaa
gctccattgtcaaaagaagccaatggggaagaattactgcgtcgccctgaaatcgactat
cgtttgttaacaacgttgccttcatttggcccggcattaactgatccccaagcagcagat
caggttgagattcaggttaaatatgaagggtatattgcccgtcagcaggaagagatcgaa
aaacagttacggaatgagaataccttattgcccgctgatctcgattatcgccaagtgtct
ggtttgtcgaatgaagttattgctaaattgaatggtcataaacctaactcgatcgggcaa
gcttcacgtatttcaggcattacacctgcggcaatttccatcttgttggtttggctgaaa
aaacaaggtttgttgcgccgtagcgcgtaa
DBGET
integrated database retrieval system
