Yersinia enterocolitica subsp. palearctica Y11 (serotype 0 3): Y11_11621
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Entry
Y11_11621 CDS
T02010
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
yey
Yersinia enterocolitica subsp. palearctica Y11 (serotype:0:3)
Brite
KEGG Orthology (KO) [BR:
yey00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
yey03016
]
Y11_11621
Enzymes [BR:
yey01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Y11_11621
Transfer RNA biogenesis [BR:
yey03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Y11_11621
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Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
CBY27019
UniProt:
A0A0H3NPD3
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Position
complement(1183560..1184681)
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AA seq
373 aa
AA seq
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MNYQLITTDSALQQVCEQARTHAHVALDTEFVRTRTYYPQLGLIQLYDGEKLSLIDPLPI
TQWQPFRELLQDVSVVKYLHAGSEDLEVFLNAFELMPTPMIDTQVLAAFSGRSLSCGFAM
LVNELEGVELDKSESRTDWIARPLSEKQCDYAAADVFYLLPLASKLVEATEAAGRMDAAK
DECELLCRRRSETLDPELAYREITNAWQLRGHQLACLQKLASWRLRQARERDLAVNFVVR
EENLWQVARYQPTSLGELDSLGLSGQEIRYHGRTLLALVAEGNAVPEDQLPPPVINLIDQ
PGYKKVFKDIKALIVSVSERSGLSSELLASRRQINQLLSWHWKLKSTETQPELLSGWRGD
LLATELTEILQQY
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
ttgaattatcagttgatcaccaccgacagtgccttacagcaggtctgcgaacaagcccga
acacatgcccatgtggcgctggacacagagtttgtcagaacccgcacctactatcctcag
ttgggcctgattcaactgtatgacggcgaaaaactttcactgattgaccctttgcccatt
acgcagtggcaacctttccgcgagttgctccaagatgtgagtgtggtgaagtatttgcat
gcgggtagtgaagatctcgaagtgttcttgaatgcgtttgaactcatgcccacgccgatg
attgatacccaagttttggccgccttttctggccgctcattatcttgcggctttgccatg
ctggtgaatgaacttgaaggtgttgaattagacaaaagcgaatctcgcacggattggatt
gctcgtcctctgagtgaaaaacagtgtgattatgcagctgctgacgtattttacctgtta
ccgttagccagcaaattagttgaagcgaccgaagcagcagggcgtatggacgccgctaaa
gatgaatgtgagctgttgtgtcgccgtcgcagtgaaacactcgatcccgaattagcctac
cgtgaaatcaccaatgcctggcagttgcgcggccatcagttggcttgtctgcaaaaattg
gcgtcatggcgcttacgtcaggcccgtgaacgtgacctggcggtgaactttgtcgttcgc
gaagagaatctgtggcaagttgctcgttatcagccaacttcgctgggtgagcttgactca
ctgggcttaagtgggcaagagattcgctatcatggccgtaccttgctggcgttggtagcg
gaaggtaatgctgttcctgaggatcagttgccaccaccggtgatcaatctgattgatcag
ccaggttacaaaaaagtctttaaagatattaaagcacttattgtgtcggtcagtgagcgc
agtgggctaagtagcgaattgttggcgtcacgccgccaaataaaccaattactcagttgg
cattggaaattgaagtcaacagaaactcaacctgaattattaagtggctggcgtggggat
ttattggctacggaattgactgagattttacagcaatattaa
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