Yersinia frederiksenii: AW19_4009
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Entry
AW19_4009 CDS
T03606
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
yfr
Yersinia frederiksenii
Pathway
yfr00470
D-Amino acid metabolism
yfr00550
Peptidoglycan biosynthesis
yfr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
yfr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AW19_4009 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AW19_4009 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
yfr01011
]
AW19_4009 (murD)
Enzymes [BR:
yfr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
AW19_4009 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
yfr01011
]
Precursor biosynthesis
Amino acid ligase
AW19_4009 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
AJI85284
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Position
4350647..4351981
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AA seq
444 aa
AA seq
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MVDYQGKKVVIIGLGLTGLSCVDFFMARGVTPRVMDTRINPPGLDKLPESVEHHVGDLNP
QWLLDADLIVASPGIALAHPALSEAADAGVEIVGDIELFCRENQAPVVAITGSNGKSTVT
TLVGEMAKAAGWQVGVGGNIGVPALTLLQQLTTQKQENQLVVLELSSFQLETTASLRASA
ATILNVTEDHTDRYPFGLQQYRAAKLRVYENAKVCVVNADDALTMPVRGADSRCISFGVD
VGDYHLNKQQGEIWLRVRGEKVLNTREMKLSGRHNYTNALAALALADAVGIPRSSSLTAL
TTFTGLPHRFQLVLERNGVRWINDSKATNVGSTEAALDGLQVDGTLHLLLGGDGKSADFS
GLTRFLQGDQIKIYCFGRDGKQLAELRPEVSQLTETMEQAMALLAKSLAPRDMVLLSPAC
ASLDQFRSFEQRGDEFARLAEELG
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggttgattatcagggtaaaaaagtggtcattatcgggctggggctaaccggcctttcc
tgcgttgatttctttatggcgcgcggcgttacgccacgtgttatggatacccgtatcaat
ccgccgggtttggataaattacccgaaagtgtcgagcaccatgtgggtgacttgaaccca
cagtggttattggatgctgatttgattgtcgccagccccggtattgcgctggcacatcct
gcattgagtgaagcggcagatgcgggtgtcgaaattgtcggtgatatcgaactgttctgc
cgtgaaaatcaggcaccagtggtggctattacgggatctaacggtaaaagcactgtgacc
acgctggttggtgaaatggcgaaagccgccggttggcaggttggggtcggcggtaatatt
ggtgttccggcgctgacattattgcaacagctgaccacgcaaaaacaagaaaatcaattg
gtggtgttggagttatccagcttccagttagaaactaccgccagcctgcgagctagcgct
gccactatattgaatgtcacggaagaccacactgaccgttatccgttcggtttgcagcaa
tatcgcgcagctaaactgcgagtgtatgaaaacgctaaagtttgtgttgtgaatgccgat
gacgcgctcaccatgccagtgcgtggtgcggatagccgctgtatcagctttggggtggat
gtcggtgactaccatctgaataagcagcagggcgaaatctggctgcgggttcgcggtgag
aaagtgctcaatacccgagaaatgaaattgagcgggcgacataactacaccaatgcgctg
gccgcactggcgctggcggatgctgtcggtattccgcgctcatcaagtttgaccgcgttg
accaccttcaccggtctgccacaccgtttccaattggtgcttgagcgcaatggcgtgcgt
tggattaatgattccaaagccaccaatgtgggcagcaccgaagcggcactggatggccta
caagtggatggcactttgcatctgttattaggtggcgatgggaaatcagcggatttctct
ggtttaactcgcttcctccagggcgaccagatcaagatttattgctttggccgcgatggt
aagcaactggctgagctgcgcccggaagtttctcaactgacggagaccatggagcaggct
atggcactgctggcgaaatcattagcaccgcgagacatggtgttgttgtcgcccgcctgc
gccagtttggaccaattccgcagtttcgagcaacgcggtgatgaatttgctcgtctggca
gaggagttgggctga
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