KEGG   Yersinia hibernica: D5F51_16655
Entry
D5F51_16655       CDS       T05961                                 
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
yhi  Yersinia hibernica
Pathway
yhi03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:yhi00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    D5F51_16655 (tssH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:yhi02044]
    D5F51_16655 (tssH)
Secretion system [BR:yhi02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   D5F51_16655 (tssH)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_5 AAA_16 AAA_22 AAA_7 Sigma54_activat nSTAND3 AAA_14 AAA_25 Zeta_toxin IstB_IS21 AAA_30 NACHT TniB RuvB_N AAA_29 YihI
Other DBs
NCBI-ProteinID: QAX80030
UniProt: A0A481QH79
LinkDB
Position
complement(3521163..3523820)
AA seq 885 aa
MAITRKNLFGKLDATLFKGIESATTICKLRGNPYVELVHWVNQLWHQDDNDLKQIVRYFA
LNADDIERGLAQALARLPTGATSISDFSYHIELAIERAWVYASLEYLDTRIRGCHLLLAM
LTNMELRRAFLAIAPEMEKIPLEQLTSDLNFITQASPEASEAATDGSAMYDGALPGEASN
AMGNKSHGTLSQYTTDLTALAREGKIDPVLGRNHEISTMVDILLRRRQNNPLLTGEAGVG
KTAVVEGLALAIVENKMPPALSQVSLLALDVVALSAGASMKGEFEARLKNVLDEAVASEK
PVILFIDEVHTLVGSGGNAGTGDAANLLKPALARGQLRTIGATTWSEFKRHIEKDPALTR
RFQVLQIDEPDENTAISMLRGLTPALEKHHGVWIMDEALQAAVRLSHRYIPARQLPDKAI
SLLDTACARVAVAQFSQPKELQQLIFQSETAQTELSSLEKAQHFGKEQGDRTQQLQVEIA
EHSAAASQLDGRWQAERELVMAITTARTQLYELVSESAPNEEKRQEHQQQLVQLEEQLSQ
VRSVLPLVQTEVNATVIASIVADWTGIPVGQMLKDDIRAVMELPQRLEDRVIGQSHALVQ
LGESIMTARAGLSDPRKPLGVFMLVGPSGVGKTETALAIAESMYGGEQNMITINMSEYQE
PHTVSSLKGSPPGYVGYGEGGVLTEAVRRKPYSVVLLDEIEKAHPDVHELFFQVFDKGQM
EDGEGRFIDFKNTILLLTSNVGSELLSNLFADPDTAPEQDGILSALQPELLKVFPAAFLG
RVTVIPYLPLQPSALQHIVRLHLERIGARLKSQHQLVLQYSDAVVEDVVDHCSVAETGAR
MLIRYIEQNITPAISKFILREQNMMPNQIVFVDKVESKFLVSVLN
NT seq 2658 nt   +upstreamnt  +downstreamnt
gtggctataacgaggaaaaaccttttcggcaaactggatgccactcttttcaaaggtatt
gaaagtgcgacgacaatttgtaaattacgtggtaacccttacgtagagttagttcattgg
gttaaccaactttggcatcaggatgataatgaccttaaacaaattgttcgttattttgct
ttaaatgcagatgatattgaacgcggtttggcacaagctttggctcgtttacccaccggc
gctaccagcatctctgacttttcataccatattgaactggcgattgagcgggcgtgggtt
tatgccagcttagagtatttagatacgcgtattcgcggctgccatcttttattggcgatg
ctgactaatatggaattgcgccgtgcatttttggctattgccccagagatggagaaaatc
ccactggagcaattaactagcgacctgaacttcattacacaggcatcgccagaagcaagt
gaagctgccaccgatggcagtgcgatgtatgacggtgcattacccggtgaagccagtaat
gcgatgggtaataaaagtcatgggacattgtctcagtacacaacagaccttacggcattg
gcgcgtgaaggcaagattgacccggtactagggcgtaatcatgaaatcagtacgatggtg
gatattttgctgcgccgtcgacaaaacaacccattacttactggtgaagcaggggtgggt
aaaactgcagtagttgaaggtctggctttggctattgtggaaaataagatgccacctgca
ttaagccaggtaagtttgctggctttggatgtggtcgccctttctgcgggtgccagcatg
aaaggtgaatttgaagcgcgtctgaaaaacgtgctggatgaagccgtggcttcggaaaaa
ccagtcattctgtttattgatgaagtacatacgctggtcggctctggcggtaatgccggg
actggcgatgcagctaacttattaaagcctgctttggcgcgtggccagttacgtaccatt
ggtgcgacaacttggagtgagtttaaacgacacattgaaaaggatccggcgctgactcgc
cgtttccaggtgctccagattgatgagcctgacgagaatacagcaatctccatgttgcgt
ggcttgactccggcattagagaagcaccacggtgtgtggattatggatgaagctttgcag
gctgcggtgcgtttgtctcatcgctatatccctgcgcgccaattgccggacaaggcgatt
agcctgcttgatacggcttgtgctcgagttgcggtcgcgcagttctcacagccaaaagaa
ttgcagcagcttatattccagagcgaaacggcgcaaaccgagctttcgtcactggaaaaa
gcgcagcattttggtaaagagcagggcgatcgtacccagcaattacaggttgagattgct
gagcattcagctgcagcaagtcaacttgatgggcgctggcaggccgagcgcgagctggta
atggcgatcacgacagcaagaacgcaactgtatgagttggtttctgagtcagcacctaat
gaagaaaagcgtcaggagcatcagcagcaattggttcagttagaagaacaactgtcccaa
gtacgcagtgtattaccgttagtgcagactgaagttaatgcaactgttattgccagtatt
gttgcggattggaccggtattcccgtcggacagatgctgaaagatgatattcgtgcggtt
atggaattgccgcaacgtcttgaagaccgtgttattggtcagtcccatgcgctagtgcaa
ttgggtgaaagtattatgacagcgcgcgcaggtttatctgatccaagaaaaccactgggt
gtctttatgttggttggcccttcaggtgtggggaaaacagaaacagcgctggcaatagca
gaaagtatgtatggtggtgaacagaatatgatcactatcaatatgagtgaatatcaggaa
ccgcacacggtttcgtcattaaaaggttcacctccaggctatgttggttatggtgagggt
ggggtattaaccgaagcggtacgacgtaaaccttatagtgtggtgctgttagacgaaatt
gaaaaagcgcaccctgatgtacatgaattattcttccaggtgtttgataaaggtcaaatg
gaagatggtgaagggcggtttattgattttaaaaataccatcttactcttaaccagtaat
gttggtagcgaactgctcagtaatttgtttgctgatccagatactgcgccggagcaagat
ggaatactgagtgcattacaacctgaactgctgaaagttttcccagcagcatttttaggg
cgtgtgacagtaattccttatttaccgctacaaccaagtgcattacagcatattgttagg
ttgcatctggagcgtattggggcgcgtttgaagtctcagcatcaactggtattacaatac
agtgatgcagtggttgaggatgttgttgatcactgttcggtggctgaaaccggtgcacgg
atgcttattcgctatattgagcagaatattacaccggcaattagtaaatttatattacga
gaacaaaatatgatgcccaatcagattgttttcgtagataaagtagaaagtaaattttta
gtttcagtactgaattaa

DBGET integrated database retrieval system