Yersinia intermedia: CH53_164
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Entry
CH53_164 CDS
T03608
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
yin
Yersinia intermedia
Pathway
yin00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CH53_164 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
yin01007
]
CH53_164 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
yin03016
]
CH53_164 (serS)
Enzymes [BR:
yin01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
CH53_164 (serS)
Amino acid related enzymes [BR:
yin01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
CH53_164 (serS)
Transfer RNA biogenesis [BR:
yin03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CH53_164 (serS)
Prokaryotic type
CH53_164 (serS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Motif
Other DBs
NCBI-ProteinID:
AJJ20749
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All DBs
Position
complement(199274..200566)
Genome browser
AA seq
430 aa
AA seq
DB search
MLDPNMLRNELDAVVEKLARRGFKLDVEMLRQQEERRKVLQVETESLQAERNSRSKLIGA
AKARGEDIEPLRLEVNVLGERLDAAKAELDKLQNEIRDLALSIPNLPDDSVPMGKDEKDN
LEVSRWGEPRKYDFEVRDHVSLGEMAGGLDFAAAVKLTGARFVVMKGQIARMHRALSQFM
LDLHTEKHGYQEAYVPYLVNHATLYGTGQLPKFGEDLFHTKPLEEESDSSNYALIPTAEV
PLTNLVRDEILEEDTLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQITRPED
SMAALEELTGHAEKVLQLLDLPYRKVLLCTGDMGFGSSKTYDLEVWLPAQDTYREISSCS
NMWDFQARRMQARCRNKIDRKTRLVHTLNGSGLAVGRTLVAVLENYQQADGRIEVPEVLR
PYMGGLDFIG
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatcccaatatgctgcgcaatgagctagacgcagtcgtcgaaaaacttgctcgc
agaggttttaaacttgatgttgagatgttgcgccaacaagaagagcgccgcaaagtttta
caggttgaaacagaaagtctgcaagcagaacgtaactcccgatcgaaattgattggtgca
gccaaggcgcgtggcgaagatatcgaaccattgcgtctggaagtgaatgtgctgggtgag
aggctggatgcggctaaggccgagctggacaagttacaaaacgaaatccgtgatctggcg
ttgtctattcctaacctgccggatgattctgtccctatgggtaaagatgagaaagacaat
cttgaagtcagccgttggggtgagccacgtaagtatgactttgaggtgagagatcacgtc
tcgctgggcgaaatggccggtggccttgattttgctgctgcagtgaagttgactggtgca
cggtttgtggtgatgaaagggcaaatagcccgtatgcaccgtgcgttatcccagtttatg
ctggatctgcataccgaaaaacacggttatcaagaagcttatgttccttatctggttaac
catgccacgttgtacgggactggccagttaccgaagtttggtgaagatttattccacacc
aaaccgctggaagaagagtcagatagcagtaactatgcgctgattcctaccgcggaagtg
ccgctgaccaatctggtacgcgatgagattctggaagaagacactctgccattgaaaatg
acggcccataccccgtgcttccgttctgaagcgggttcctatggtcgtgatacccgtggc
ttgattcgtatgcatcagttcgacaaagttgagatggtgcagattactcgcccggaagat
tcgatggcggcactggaagagttgaccggtcatgcagagaaagttctgcaattactggat
ttgccataccgtaaagtgctgctgtgtactggtgatatgggctttggctccagcaagact
tacgatttggaagtatggctaccagcgcaggatacttaccgcgaaatctcttcttgttct
aacatgtgggatttccaggcgcgccgtatgcaagctcgttgccgcaataagatcgataga
aaaacccgtttagttcataccctgaatggttctggtttggcggttggtcgcacgttggtt
gctgtgctggaaaactaccagcaggcagatggccgaattgaggttccagaagtattacgc
ccatatatgggtggcctggactttatcggttaa
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