Yersinia intermedia: CH53_1976
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Entry
CH53_1976 CDS
T03608
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
yin
Yersinia intermedia
Pathway
yin00521
Streptomycin biosynthesis
yin00523
Polyketide sugar unit biosynthesis
yin00525
Acarbose and validamycin biosynthesis
yin00541
O-Antigen nucleotide sugar biosynthesis
yin01100
Metabolic pathways
yin01110
Biosynthesis of secondary metabolites
yin01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
CH53_1976 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CH53_1976 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
CH53_1976 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CH53_1976 (rfbB)
00525 Acarbose and validamycin biosynthesis
CH53_1976 (rfbB)
Enzymes [BR:
yin01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CH53_1976 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
adh_short
Sacchrp_dh_NADP
KR
Motif
Other DBs
NCBI-ProteinID:
AJJ17442
UniProt:
A0A0T9MHW5
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Position
2237592..2238659
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AA seq
355 aa
AA seq
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MRRILVTGGAGFIGSAVVRHIIDGTSDSVVVVDKLTYAGNLESLAVVAHSERYAFEQVDI
CDRAELDRVFAHYQPDMVMHLAAESHVDRSIDGPAAFIETNVVGTYTLLEAARHYWQQLS
AEAKQAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRTYGL
PTLVTNCSNNYGPYHFPEKLIPLVILNALAGKPLPVYGNGAQVRDWLYVEDHARALYQVV
TEGVVGETYNIGGHNERKNIEVVETLCTLLDELVPAKPAGIEHYRDLITYVKDRPGHDMR
YAIDAGKIERELGWRPQETFESGIRKTLLWYLNNESWWRRVQDGSYAGERLGLSD
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
ttgagacgtattctagtcacaggcggggccggttttatcggctctgcggtggtaagacat
attatcgatggcacttcagacagcgtagtggtggtggataagctcacctatgccggtaat
ctggagtcactggctgttgtcgcccacagcgaacgttatgcgtttgagcaggtggatatc
tgtgatcgcgctgaactggatcgggtttttgcgcactatcagccggatatggtgatgcat
ctggcggcagaaagtcatgtggatcgctctattgatgggccagcggcttttatcgaaact
aacgtggtgggtacatacaccctgttagaggcggcgcgtcattactggcaacaactgagt
gctgaggcgaagcaggcgtttcgcttccaccatatctcgaccgatgaggtatatggcgat
ctgcacggtactgatgatctgtttaccgaaaccacaccttatgcgccaagcagcccctat
tcagcgtctaaggcgtccagtgaccatttagttcgtgcctggttgcggacttatggttta
ccaacgctggtaactaattgctcaaataactatgggccatatcatttccctgagaagttg
ataccgctggttattctgaatgcgctggcgggtaaaccgttaccggtgtatggcaatggc
gcacaggtacgcgactggttgtatgtcgaagaccacgcgcgggccttgtatcaggtggtt
accgaaggtgtcgtgggtgagacatacaatattggcggccataatgagcgcaaaaatatt
gaagtggttgaaaccctttgtacacttttggatgaacttgtcccagccaaaccggccggc
attgagcattaccgtgacctgatcacctatgtcaaagatcgtccagggcatgatatgcgc
tatgccattgatgctggcaagattgagcgtgaattaggctggcggccacaggaaaccttc
gaaagtggcatccgcaaaaccctgttgtggtatttgaataatgaatcgtggtggcgtcgt
gttcaggatggttcttacgccggtgagcgtttgggtttaagcgactga
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