Yersinia intermedia: CH53_3716
Help
Entry
CH53_3716 CDS
T03608
Symbol
pgaA
Name
(GenBank) poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA
KO
K11935
biofilm PGA synthesis protein PgaA
Organism
yin
Yersinia intermedia
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PgaA_barrel
TPR_19
TPR_14
TPR_2
TPR_7
TPR_11
Coatomer_E
TPR_6
TPR_1
Motif
Other DBs
NCBI-ProteinID:
AJJ19113
UniProt:
A0A0T9LR37
LinkDB
All DBs
Position
4123621..4126089
Genome browser
AA seq
822 aa
AA seq
DB search
MYNAFTTLLRPLHRHRITLLALLISGLSVNPVLADTQYDSLIIQARSGDTAPVLDYLQKE
SKSGPLNSGQVDDWLQIAGWAGRDQEVIEVYERYHSSMNLSSRGLASAARAYRNEKRWDQ
ALALWQSSLKKDPTNPDLITGMIMTQADSGRGGEALQQAKDLAARDPSAKNYMTLSYLNR
ATNRNYDALQASSEAVRLAPESEEVLKNHLEILQRNRIADPALQLAKENPKLVTAEQYRQ
LERDAAAEQVRMAVLPTRSETERFYIADQALADYQDLLTRWSKDPEAQADYQRARIDRLG
ALLVRRNTEQLIKEYEGMEAEGYKMPDYARRWAASAYIDRRMPEKAAPILTSLYYADGKT
FRNSDDLLDADDLYYALNESEQLDKAHQFAKNYSEQTPYQVGVYGLPGKEPNDDWMEGQT
LLVQSLVALNDLPAAQKKLETLSSTAPANQNLRIALASVYLARDLPRKSEQELKAIESLA
PRSLILERAQAETAMDLQEWHQMELLTDDVITRSPEDVPSQELDRQRKVHNMYELRVTGN
RTISSNSPISGNKDFGVETLLYSPPIAENWRVFGGGSYDNAQFEEGKGINRAMRLGGEWT
SRDHWVEAEVNNQNYGFGNKTGARLSTWYDFNDHWRVGGQVERLAKETPLRALKNNISAN
SASAYVFWKADDRRDAEFSVTPSRFSDGNNRWEYEFNARQRIWTGPYLTADLSLGLASSH
NTKEDVIYYNPKSDFTYVPAITLNHIMYRHYKTVWSQQIQFGVGGYWEKNYGNGLVTTAG
YGQRIQWNDVVDTGVAVTYDKRPYDGAREHDLSLAFDLNYRF
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgtataacgcatttacgacactactgcgcccgttgcaccggcacagaataactttatta
gcgctattaatttccggcctttcagttaatccagttttggcggatacacagtatgattcg
ttaatcatccaagccagatcaggagataccgcgccggtccttgactacttacaaaaagaa
tccaaatctggccctctcaatagtgggcaggtcgacgactggttacaaatagccggttgg
gcagggcgcgatcaagaagtcattgaagtttacgaaagataccactcgtcaatgaatctt
tcttcgcgcggcttagcgtctgcggcacgtgcatatcgcaatgaaaaacgttgggatcag
gcgttggcattgtggcaaagcagtttaaagaaagacccaaccaacccagaccttatcact
ggcatgataatgactcaggcggattctgggcgtggtggtgaagctttacagcaggcaaaa
gacttggctgcgcgtgacccttccgcaaaaaactatatgaccctttcttatcttaatcga
gcaaccaaccgcaattacgatgctttgcaggcctccagcgaggcggtgcgactggcacct
gaatctgaggaagtattaaagaatcaccttgagattctgcaaagaaaccgtattgccgat
cctgcgttgcaacttgctaaagagaatccaaaattagtgaccgcagagcaatatcgacaa
cttgagcgagatgctgctgcagaacaagtccgtatggcggtgttaccaacgcgcagtgaa
acggagcgattctacatcgctgatcaagcgttggctgattaccaggatttgttaacccgc
tggagcaaagatcctgaagcacaggccgactatcaacgtgcgcgcatcgatagattaggc
gcattattggttcgccgtaataccgaacaacttattaaagaatatgaaggcatggaagcc
gaaggctacaaaatgccggattatgcgcgtcgctgggcggcatctgcttatatcgatcgc
cggatgccagaaaaagcagcaccgatcctgaccagtttgtattacgccgatggcaaaaca
ttccgcaacagcgatgatttgcttgatgcggatgatctctattacgcgttgaatgaaagt
gagcaattggacaaggcgcatcaattcgctaaaaactacagcgagcaaacgccgtatcag
gtgggggtttatggtctgccgggtaaagagcccaatgatgattggatggaagggcagacc
ttgctggttcaatccctggtggcactcaatgatctgcctgcggcacagaaaaaactggaa
acgctatccagtaccgcgcctgctaaccagaatttacgtattgcattagccagtgtttat
ttggcaagagatttaccacgcaaatctgaacaagagttgaaagcaatagagtcattggcc
ccgcgcagtctgattctggaacgcgcacaagctgaaactgcgatggacttgcaggaatgg
catcagatggagttactcactgatgatgtgattacccgttctcctgaagatgtcccctct
caggaactcgatcgccagcgcaaagtgcataacatgtatgaattgcgtgtgaccggtaat
cgaactatttcttctaatagcccaattagtggtaacaaggactttggcgttgaaacgttg
ctgtatagccctccgatagccgaaaactggcgagtattcggtggtggtagctacgacaat
gcgcaatttgaagaaggaaaaggcattaatcgtgctatgcggttagggggcgagtggact
tcccgtgaccattgggttgaggccgaagtgaataatcagaattacggttttggtaacaaa
accggtgctcggttatcgacttggtacgattttaatgatcactggcgggtgggtgggcag
gttgagagattggccaaagagaccccattgcgtgccttgaaaaataatatatccgctaac
agtgcgtcagcttatgtgttttggaaagctgatgatcggcgcgatgctgaatttagcgtg
acaccgtcacgtttctctgacggcaacaaccggtgggaatatgagttcaatgcacgccag
cgtatttggactggcccttacctgacggcagatcttagcttagggttagcgtcgagccat
aacaccaaagaagacgtaatttactataacccgaaaagtgatttcacctacgtccctgcc
attaccttaaatcacatcatgtatcgccattataaaaccgtatggagccaacaaattcag
ttcggtgtcggtggttattgggagaaaaactacggtaatggtctggtaaccacagcaggc
tatgggcagcgtattcaatggaatgatgtcgtggatacgggagtggcagtgacctacgat
aagcgcccttatgatggtgctcgtgagcacgatctctcgctcgctttcgatttgaattac
cgtttctaa
DBGET
integrated database retrieval system
