Yersinia rochesterensis: CH54_1615
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Entry
CH54_1615 CDS
T03609
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
ykr
Yersinia rochesterensis
Pathway
ykr02024
Quorum sensing
ykr03060
Protein export
ykr03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ykr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
CH54_1615 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CH54_1615 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CH54_1615 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ykr02044
]
CH54_1615 (ffh)
Enzymes [BR:
ykr01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
CH54_1615 (ffh)
Secretion system [BR:
ykr02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
CH54_1615 (ffh)
Eukaryotic Sec-SRP protein
CH54_1615 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
cobW
AAA_31
AAA_30
AAA_24
KTI12
AAA_33
APS_kinase
YqeC
AAA_14
VirC1
AAA_19
ArsA_ATPase
TsaE
AAA_16
DUF5407
Motif
Other DBs
NCBI-ProteinID:
AJJ37864
LinkDB
All DBs
Position
complement(1737209..1738570)
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AA seq
453 aa
AA seq
DB search
MFENLTDRLSRTLRNISGRGRLTEENIKETLREVRMALLEADVALPVVRDFINRVKERAV
GHEVNKSLTPGQEFVKIVKNELIAAMGEVNNELNLAAQPPAVVLMAGLQGAGKTTSVAKL
GKFLKEKQKKKVLVVSADVYRPAAIKQLETLAEGVGIDFFPSDVQEKPIDIVNRALQQAK
LKFYDVLIVDTAGRLHVDEAMMDEIKQVHAAINPVETLFVVDAMTGQDAANTAKAFNEAL
PLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKSDALEPFHPDRVASRILGMGDV
LSLIEDIESKVDRVQAEKLATKLKKGDGFDLNDFLDQLKQMRNMGGMASMLSKMPGAGQL
PDNVKSQMDDKVTVRMEAIINSMTLKERAKPEIIKGSRKRRIATGSGVQVQDVNRLLKQF
DDMQRMMKKMKNGGLAKMMRGMKGMMPPGFPGR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagaacttaactgatcgattgtcgcgcacactgcgcaatatcagcggccgtggc
cggctgacagaagaaaatattaaagaaacgctacgtgaagtacgcatggcgttattggag
gctgacgtagctctgccggtggttcgtgactttattaaccgggtaaaagagcgtgctgtc
gggcatgaggtgaacaaaagcctcacgccgggtcaggaattcgtcaaaatcgttaagaat
gaacttattgccgccatgggcgaggtcaataacgaactgaatctggcagcgcaaccgcca
gcagtggtgttaatggctggcctacaaggtgcgggtaaaaccaccagtgtggctaaactg
ggtaagttccttaaagaaaaacagaagaaaaaagtgctggtggtgtctgccgacgtttat
cgccctgcggcgatcaaacagttggaaactctggctgaaggtgttggcattgatttcttc
ccgtctgatgtacaggaaaaaccgattgatattgtcaatcgggctctgcaacaggcgaaa
cttaagttttatgatgtcctgattgtcgatactgccggtcgtttgcacgttgatgaagcg
atgatggacgaaatcaaacaagttcatgccgcgattaatccggttgaaaccttgtttgtt
gttgatgccatgaccggtcaggatgccgccaatacagcgaaagcattcaatgaagcgctg
ccactcaccggtgtggtgttaaccaaagttgatggtgatgctcgtggtggtgctgcgctg
tctatccgccatattaccggcaagccgattaaattcctcggtgttggcgaaaagtcagat
gcacttgaaccgttccatcccgatcgcgtggcttcacgtattttgggaatgggcgatgtt
ctgtcgctgattgaagatatcgaaagcaaagttgaccgcgtacaagcggaaaaactggca
actaagctgaaaaaaggcgatggctttgatcttaatgactttcttgatcagctaaaacaa
atgcgcaatatgggcggcatggccagcatgctaagtaaaatgccgggcgcaggtcagttg
ccagataacgtgaagtcgcagatggatgataaggtaaccgtgcggatggaggctatcatc
aactcgatgacgctgaaagagcgcgccaagccagaaatcattaaaggctcacgtaagcgc
cgtatcgccactggttctggtgtgcaagtgcaggatgttaaccgcttgctgaagcagttc
gatgatatgcagcgcatgatgaagaaaatgaaaaatggcggtttggccaaaatgatgcgt
ggcatgaaaggtatgatgccaccgggtttcccaggccgttga
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