Yersinia rochesterensis: CH54_1777
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Entry
CH54_1777 CDS
T03609
Name
(GenBank) D-alanine--D-alanine ligase family protein
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
ykr
Yersinia rochesterensis
Pathway
ykr00470
D-Amino acid metabolism
ykr00550
Peptidoglycan biosynthesis
ykr01100
Metabolic pathways
ykr01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ykr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CH54_1777
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CH54_1777
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CH54_1777
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ykr01011
]
CH54_1777
Enzymes [BR:
ykr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
CH54_1777
Peptidoglycan biosynthesis and degradation proteins [BR:
ykr01011
]
Precursor biosynthesis
Amino acid ligase
CH54_1777
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATPgrasp_ST
RimK
ATP-grasp
ATPgrasp_Ter
ATPgrasp_YheCD
TTL
Motif
Other DBs
NCBI-ProteinID:
AJJ35807
LinkDB
All DBs
Position
complement(1922727..1923647)
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AA seq
306 aa
AA seq
DB search
MADKVAVLLGGTSAEREVSLLSGQAVLAGLREAGIDAHGVDTRDFPVTQLKEQGFNKVFI
ALHGRGGEDGTLQGVLEFLKLPYTGSGVMASALTMDKLRTKLVWQALGLPISPYVALNRQ
QFETLSSEELAACVAKLGLPLIVKPSHEGSSVGMSKVDWASELHAALVEAFRHDTDVLIE
KWLSGPEFTVAILGEDVLPSIRIQAPGVFYDYEAKYLSDETQYFCPSGLSVELEQQLAEL
ALQAYQALGCSGWGRVDVMQDSDGGFYLLEVNTSPGMTSHSLVPMAARQYGLSFSQLVAR
ILTLAD
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaagttgcggtactgctgggtggaacctctgctgaacgtgaagtttcattg
ctatcgggccaggcggttttagccggtttgagagaagccggtatcgacgcccatggggta
gataccagagacttcccggtcactcaattgaaagaacagggttttaataaggtctttatt
gctctgcatggccgtggtggcgaagacggtacattgcaaggtgtgttggagttcctgaaa
ctgccttataccggcagcggcgtgatggcttcggccctgaccatggacaaattgcgcacc
aaattggtgtggcaagccttaggtttgccaatttcgccttatgtggcgctgaaccgtcaa
cagtttgaaacactttcgtcagaggaattagcggcatgtgtcgctaagcttggtctgcct
ttaatcgttaaaccaagtcacgaaggctctagcgtgggcatgagtaaagttgactgggct
agcgaattgcatgctgctctggttgaagctttccgtcatgacaccgatgtgctgattgaa
aaatggttgagcggcccggaattcacggtcgctatccttggcgaggatgttttaccgtcc
atcaggattcaagcacccggtgtgttttatgattatgaagccaagtatctgtctgatgaa
acacagtatttctgcccaagcggtttaagtgttgagttagagcaacaattagcagaatta
gcattacaggcttatcaggcgctaggttgcagcggttggggccgggttgatgtcatgcaa
gacagcgacggcggtttttatctgctggaagtgaatacttcaccggggatgaccagccac
agtttagtgccaatggcagcccgccaatatgggttgagtttttcccagttggtggcccga
attctgacgttggctgactga
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