Yersinia rochesterensis: CH54_2048
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Entry
CH54_2048 CDS
T03609
Name
(GenBank) exonuclease family protein
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ykr
Yersinia rochesterensis
Brite
KEGG Orthology (KO) [BR:
ykr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ykr03019
]
CH54_2048
03009 Ribosome biogenesis [BR:
ykr03009
]
CH54_2048
Messenger RNA biogenesis [BR:
ykr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CH54_2048
Ribosome biogenesis [BR:
ykr03009
]
Eukaryotic type
Pre-60S particles
RNases
CH54_2048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AJJ34600
LinkDB
All DBs
Position
complement(2243212..2243757)
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AA seq
181 aa
AA seq
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MAENQNNLIWIDLEMTGLDPQRDRIIEIATLVTDANLNILAEGPVLAVHQSDEQLGLMDE
WNVRTHTGSGLVQRVKDSPFSDSDAELQTIEFLKQWVPAGVSPICGNSVGQDRRFLFRYM
PELEAYFHYRYLDVSTLKELARRWKPEILAGFKKKNTHQALDDIRESVAELAYYREHFIQ
S
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaatcaaaataatctaatctggatcgatctagaaatgaccggtcttgatccg
cagcgggatcggatcatcgagatagccacactggttaccgatgctaacctgaatatcctg
gcggaaggcccggtgttggccgtccaccagtctgatgagcagcttgggctaatggatgag
tggaatgtgcgcacgcataccggcagtggcttggttcagcgcgttaaagacagccccttt
agtgatagcgatgctgagttgcaaacaattgaatttctaaagcagtgggttccggcaggc
gtttcccctatttgcggtaacagcgtgggtcaagaccggcgcttcctgttccgctatatg
ccagagcttgaagcttacttccattaccgttatctggatgtcagcaccttaaaagaactg
gcccgccgctggaaacctgagattctggcgggttttaaaaagaaaaatactcatcaggca
ctggatgatatccgcgagtcagtggccgagcttgcttattatcgcgaacattttattcaa
tcttaa
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