Yersinia rochesterensis: CH54_2326
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Entry
CH54_2326 CDS
T03609
Name
(GenBank) S1 RNA binding domain protein
KO
K06959
protein Tex
Organism
ykr
Yersinia rochesterensis
Brite
KEGG Orthology (KO) [BR:
ykr00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
CH54_2326
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GFIT
Motif
Pfam:
Tex_N
Tex_YqgF
HHH_3
HHH_9
S1
HHH_7
YqgF
T2SSK
HHH_6
Motif
Other DBs
NCBI-ProteinID:
AJJ34114
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Position
2504187..2506553
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AA seq
788 aa
AA seq
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MNEQLSSIIASEIQARPEQVIAAIRLLDEGNTVPFISRYRKEVTGGLDDTQLRQLESRLG
YLRELEDRRQTILKSIEDQGKLTEQLAGAINGTMSKTELEDLYLPYKPKRRTRGQIAIEA
GLESLADSLWHDPQQDPEQVALAFVDAEKGVADTKAALDGARYILMERFAEDATLLAKVR
QYLWKNAHLVSKVVEGKEQEGAKFRDYFDHHEPIAQVPSHRALAMFRGRNEGVLQLALNP
DPQFDEPPRESQGEQIIINHLDLRLNNAPADSWRKAVVNWTWRIKVLMHLETELMSTLRE
RAEDEAINVFARNMQDLLMAAPAGMRATMGLDPGLRTGVKVAVVDATGKLVAFDTIYPHT
GQTAKAAAVVAALCIKHQVELVAIGNGTASRETERFFTELQQQYPAVTAQKVIVSEAGAS
VYSASELAALEFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQSQLAK
KLDAVVEDCVNAVGVDLNTASVPLLNRVAGLTRMMAQNIVNWRDENGRFHNREQLLKVSR
LGPKAFEQCAGFLRINHGNNPLDASTVHPEAYPIVERILAATEQALQDLMGNATALRNLN
ARDFTTEKFGVPTVTDILRELEKPGRDPRPEFKTATFAEGVETLNDLTPGMILEGSVTNV
TNFGAFVDIGVHQDGLVHISSLADKFVDDPHKVVKAGDIVKVKVMEVDLQRKRIALTMRL
DEQPGESGSRRGNGGENRANANNSSNNSRPRNNNESNSRPAAKGRVDSNSGSNNSAMSDA
LAAAFKKR
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaacaactgagcagcattattgcaagcgaaatacaggcgcgaccggagcaagtg
attgctgcaatacgcctgttggatgaaggtaataccgtgccctttatttcacggtatcgt
aaggaagttaccggcggattggatgatacccagctgcgccagttggaaagccgtttgggt
tatctgcgcgaacttgaagaccgccgccaaaccattcttaaatcaatagaagatcaaggc
aagctcaccgagcaactcgccggtgccattaacggcaccatgagtaaaaccgagttggaa
gatttataccttccttataaacccaagcgccgcacccgtgggcagattgctattgaagcc
ggtctggaatccttggcagacagcttatggcatgatccacagcaagacccagaacaggtc
gcgctcgcttttgtcgatgctgaaaaaggcgtggcggataccaaagcggcactggatggc
gcgcgctatatcctgatggagcgttttgcggaagatgcaacattgctggcgaaagtgcgc
caatacttgtggaaaaacgcccatttagtatcaaaagtagtggaaggcaaagagcaggaa
ggcgctaaattccgcgattactttgatcaccacgaacctatcgcccaagtcccttctcac
cgcgccctagcgatgttccgtggccgtaatgaaggtgtgctgcaactggcgctgaatccc
gatccccagtttgacgagccgcctcgcgagagtcagggcgaacagattattatcaatcac
ctggatctgcgcctgaataatgcgccggcagacagctggcgcaaagcggtggtcaactgg
acttggcgcattaaggtgctgatgcatcttgaaaccgagttgatgagcaccttgcgtgaa
cgggccgaagacgaagctatcaatgtattcgcccgtaacatgcaagatttgctgatggcg
gccccagcagggatgcgcgccactatgggcctcgatccgggcctgcgcaccggggtaaaa
gtggcggtagttgatgctaccggcaagctggttgccttcgataccatttatcctcatacc
gggcagacggcaaaagccgccgctgtagtggccgccctgtgcatcaaacatcaggttgaa
ttggtagcgattggtaacggcaccgcatcacgggaaaccgagcgcttctttactgagctg
caacagcagtatccggcggtgacggcgcagaaagtcattgtcagtgaagccggggcgtca
gtttattcagcctcggagctggcggcactggaattcccagatctggatgtttccatccgt
ggcgcggtctctattgcccgccgcttgcaagacccgttagcggaactggtgaaaatcgac
ccgaaatccatcggggtcggccaatatcagcatgatgtcagccaaagccaattggcgaaa
aaactggatgcggtggtagaagactgtgtaaacgccgtgggagtcgatttgaacaccgcg
tccgtgccattgctgaaccgagtcgccggtttgacccgcatgatggcgcaaaatattgtg
aactggcgtgatgagaatggccgcttccataaccgcgaacaattgctgaaagtcagccgc
ttagggccaaaagcctttgaacagtgcgccggtttcttgcgtatcaaccacgggaataac
ccgctggatgcctcaacagtgcatccagaggcctatccgattgtcgagcgtattttggcc
gccaccgagcaagctttgcaggatttgatgggcaatgccacggccttgcgtaatctcaat
gcccgcgatttcaccaccgagaaatttggtgtgccgacggtcaccgatatcttacgcgag
ctagaaaaaccgggccgagatccccgccctgagtttaaaacggcgacctttgccgagggc
gtggaaacactgaatgacctgacgccgggtatgatcctcgaaggctcagtgactaacgtg
actaactttggtgcgtttgtcgatatcggcgttcatcaggatggtctggtgcatatttcc
tcactggcagataaatttgtcgatgacccgcataaggtggtgaaagccggcgatatcgtc
aaagttaaagtcatggaagtggatttgcagcgcaaacgtattgctctgacgatgcgcctt
gatgagcaaccgggtgaaagcggttcacgccggggtaatggcggtgaaaaccgtgccaat
gccaataattccagtaataacagccgaccacggaataataatgaatccaatagccgccca
gcagccaaagggcgcgtagacagcaattctggcagcaacaacagcgccatgagtgacgcg
ttggctgcggcgtttaaaaagcgctga
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