Yersinia rochesterensis: CH54_2754
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Entry
CH54_2754 CDS
T03609
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
ykr
Yersinia rochesterensis
Pathway
ykr00521
Streptomycin biosynthesis
ykr00523
Polyketide sugar unit biosynthesis
ykr00525
Acarbose and validamycin biosynthesis
ykr00541
O-Antigen nucleotide sugar biosynthesis
ykr01100
Metabolic pathways
ykr01110
Biosynthesis of secondary metabolites
ykr01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
ykr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
CH54_2754 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CH54_2754 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
CH54_2754 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CH54_2754 (rfbB)
00525 Acarbose and validamycin biosynthesis
CH54_2754 (rfbB)
Enzymes [BR:
ykr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CH54_2754 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
adh_short
Sacchrp_dh_NADP
KR
NAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
AJJ35736
UniProt:
A0A0T9Q7A7
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Position
2989478..2990551
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AA seq
357 aa
AA seq
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MALRRILVTGGAGFIGSAVVRHIIDGTSDSVVVVDKLTYAGNLESLAVVAHSERYAFEQV
DICDRAELDRVFAQYRPDVVMHLAAESHVDRSIDGPAAFIETNVVGTYQMLEAARHYWQQ
LSAEEKLAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRTY
GLPTLVTNCSNNYGPYHFPEKLIPLVILNALAGKPLPVYGNGAQVRDWLYVEDHARALYQ
VVTEGVVGETYNIGGHNERKNIEVVETICTLLDELVPEKPAGIAHYCDLITYVKDRPGHD
MRYAIDASKIERELGWRPQETFESGIRKTVLWYLNNESWWRRVQDGSYAGERLGLSD
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgagacgtattctagtcacaggtggggccggttttatcggctctgccgtggta
agacatattatcgatggcacctcagatagcgtagtggtggtggataagctgacctacgcg
ggcaatttggagtcactggcagtggttgctcacagcgagcgctacgcttttgaacaggtt
gatatctgtgaccgcgctgagctggatcgggtttttgcacagtatcgaccggatgtggtg
atgcatttggcagcagaaagccatgttgaccgctctattgatggcccagcggcctttatc
gagaccaatgtcgtgggcacttaccagatgttggaagcggcgcgtcattactggcagcaa
ctgagtgcagaggaaaaactggcgtttcgcttccatcatatctccactgatgaagtgtat
ggcgacctacacggcaccgatgatttattcaccgaaaccacgccttatgcgccaagtagc
ccttattctgcatctaaagcctctagcgaccatttagttcgcgcgtggttgcgaacctat
ggtttaccgactttggtgaccaattgttccaataattatggcccatatcattttcctgag
aaattgatcccactggtcattctgaatgcgctcgcgggtaaaccgctgccagtgtatggc
aatggcgcacaggttcgtgattggctgtatgttgaagatcacgcccgggccttgtatcaa
gtggtgaccgagggtgtggtgggcgaaacttacaatattggcggtcataacgagcgcaag
aatattgaagtggttgagactatctgcacacttttggatgaattggttccagaaaaaccg
gcaggaattgctcactattgtgacctgattacctacgtcaaagaccgcccaggccatgat
atgcgctatgccatcgatgccagcaaaattgagcgggaactgggctggcgaccgcaggag
actttcgaaagtggtattcgcaaaaccgtattatggtatttgaataatgaatcttggtgg
cgtcgtgttcaggacggttcttacgctggtgagcgtctgggcttgagtgactga
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