Yersinia rochesterensis: CH54_3719
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Entry
CH54_3719 CDS
T03609
Name
(GenBank) RND transporter, hydrophobe/amphiphile efflux-1 family protein
KO
K18138
multidrug efflux pump
Organism
ykr
Yersinia rochesterensis
Pathway
ykr01501
beta-Lactam resistance
ykr01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ykr00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CH54_3719
01503 Cationic antimicrobial peptide (CAMP) resistance
CH54_3719
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ykr02000
]
CH54_3719
01504 Antimicrobial resistance genes [BR:
ykr01504
]
CH54_3719
Transporters [BR:
ykr02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
CH54_3719
Antimicrobial resistance genes [BR:
ykr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CH54_3719
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF
MMPL
Patched
Motif
Other DBs
NCBI-ProteinID:
AJJ37666
LinkDB
All DBs
Position
complement(4050414..4053566)
Genome browser
AA seq
1050 aa
AA seq
DB search
MAKFFIDRPIFAWVIAIIIMLAGTLAIMKLPVAQYPTIAPPAITISANYPGADATTVQNT
VTQVIEQNMNGIDNLLYMSSSSDSSGNVQLTLTFNSGTDPDIAQVQVQNKLQLAMPLLPQ
EVQQQGVSVEKSSSSFLMVAGFISEDGTMLQEDIADYVGSNVKDPISRTTGVGDVQLFGS
QYAMRIWMDPHKLNNYGLTPVDVINAIKVQNNQVAAGQLGGTPPVPGQELNSSIIAQTRL
TNAEEFSQIMLKVNTDGSQVRLKDVAIVQLGAESYNIIARYNGKPAAGIGIKLATGANAL
NTSAAVKAELAKLQPFFPAGLKVVYPYDTTPFVKISINEVVKTLVEAIILVFLVMYLFLQ
NFRATLIPTIAVPVVLLGTFAILSAFGYSINTLTMFGMVLAIGLLVDDAIVVVENVERVM
QEEGLPPKEATKKSMEQIQGALVGIALVLSAVFVPMAFFGGATGAIYRQFSITIVSAMVL
SVLVALILTPALCATMLKPIAKGEHGPKTGFFGWFNRMFESSTHHYTDSVANILRSTGRY
LVIYLAIVIGMGVLFLRLPSSFLPEEDQGVFLTMVQMPAGATQERTQKVLNQVTDYYLDK
EKDVVNSVFTVNGFGFSGQGQNTGLAFVSLKNWDERPGEQNKVPAIVSRASAAFSQIKDG
LVFAFNLPAIVELGTATGFDFQLIDQGNVGHQKLTEARNQLLGMAAQHPDMLVGMRPNGL
EDTPQFKVEVDQEKAQALGVAISDINTTLGTAMGGSYVNDFIDRGRVKKVYVQADAPFRM
LPSDIDKWYVRNNAGQMVSFATFSTAKWEYGSPRLERYNGLPSMEILGQAAPGKSTGEAM
DLMQELAAKLPSGVGYDWTGMSYQERLSGNQAPALYAISLIVVFLCLAALYESWSIPFSV
MLVVPLGVVGALIAASLRGLENDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLV
ESTLEAVRMRLRPILMTSLAFILGVMPLVISSGAGSGAQNAVGTGVMGGMITATVLAIFF
VPVFFVVVRRRFSRKSEDVEHAHAVDHKVK
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atggctaagttctttatagatcgccctattttcgcttgggttatcgctatcataatcatg
ttagccggtacccttgcgataatgaaattacctgttgcgcaatatccgaccattgcgccg
ccggcaattacaatctccgccaactatcctggcgccgatgcgacgactgtgcagaataca
gttacgcaggttatcgaacagaacatgaacggtatcgataacctgttgtacatgtcttcc
agcagtgactcctccggtaacgttcagttgacgttgacctttaactccggcactgatccc
gatatcgcgcaggttcaggtccagaacaaactgcaattagccatgccattactgccgcaa
gaagtgcagcagcaaggtgtgagcgttgaaaagtccagtagtagcttcctgatggttgcc
ggctttatttcagaagacggcaccatgctgcaagaagatattgctgactatgtcggttct
aacgttaaagacccgatcagccgtaccacgggggtaggtgatgttcagttattcggttcc
caatacgcgatgcgtatctggatggacccgcataaactgaataactacggtttgacgccg
gttgatgttatcaacgcgatcaaagtacagaataaccaggttgccgcagggcaattaggt
ggtacgccaccagtgccgggtcaagaactgaactcctctattattgctcagacccgtctg
accaatgcggaagaattcagccagatcatgctgaaagtcaatactgatggctcacaggtt
cgcctgaaagatgtggctatcgttcaattgggtgctgaaagctataacattattgctcgt
tataatggtaagccagcggcaggtatcggtattaagctggcgacaggggctaacgccctg
aacacctctgctgcggtaaaagctgaactggcaaaattacagccgttcttccccgcaggg
ctgaaagtggtttacccgtacgacaccacaccgttcgttaaaatctccattaacgaagtg
gttaagacgctggtcgaagctatcatcctggtgttcttggtgatgtatctgttcttgcaa
aacttccgcgcaacgttgattccaaccattgcggtaccggtcgtattgctggggacgttc
gccattctttccgcctttggctattcgataaacactcttacgatgttcgggatggtgttg
gcgatagggctattggtggatgatgccatcgtcgtcgtcgagaacgtcgaacgtgtgatg
caagaggaagggctaccgccgaaagaagccactaagaaatccatggagcaaatccagggt
gcattggtggggatcgcgttggtgctttctgccgtatttgttccgatggccttcttcggc
ggcgcaaccggggcgatttatcgtcagttctctattaccatcgtttcggccatggtgctc
tcggttctggtagcattaattctgaccccagcactgtgcgccaccatgttgaaacctatc
gctaaaggcgaacatggcccgaaaaccggcttctttggttggtttaaccgcatgtttgag
agcagtacccaccactataccgacagtgttgccaatatcctgcgcagcaccggccgttat
ttggttatctatctggctattgtgattggtatgggcgtgttgttcctgcgcttaccctct
tcattcttaccggaagaagatcagggcgtgttcctgaccatggtacaaatgcctgcgggt
gcgacccaagaacgaactcagaaagtgctgaatcaggttactgactattatctcgacaaa
gaaaaagacgtggttaactctgtatttacggttaacggcttcggtttcagcggtcaaggt
cagaataccggtctggcattcgtgagtttgaaaaattgggatgaacgccctggcgagcaa
aacaaagttccggccattgtgagtcgtgcttctgctgctttctcgcaaattaaagacggt
ttggtcttcgcctttaacttgccggcgattgtggaattgggtaccgctaccggcttcgac
ttccagttaattgaccaaggtaacgtggggcatcagaagttaacggaagcccgtaaccaa
ctgcttggtatggcggcacaacacccggatatgctggtgggtatgcggccaaacgggctg
gaagatacgcctcagttcaaagtcgaagtagatcaggaaaaagcacaagcgctgggcgtg
gcaatttctgatatcaatactaccttgggtaccgccatgggcggcagctatgtaaacgac
tttatcgaccgcggtcgtgtgaagaaagtttatgtgcaggcggatgcgccattccgtatg
ttaccgagtgatattgataagtggtatgtccgtaataatgcaggtcagatggtgtcattt
gccaccttctccactgccaaatgggaatacggctcaccacgactggaacgttataacggc
ttaccatccatggaaattctgggtcaggccgctccgggtaaaagtaccggtgaagctatg
gacctgatgcaagaattggccgctaaattaccaagcggcgtgggttatgactggacgggc
atgtcctatcaggaacgtttgtcaggtaaccaagcgccagcgctgtatgccatctcactg
attgtggtcttcttgtgtctggcggcgttgtatgaaagctggtcaattccattctctgtg
atgttggtggtaccactgggtgtggtcggtgcgttaattgccgcctctctgcgtgggctg
gaaaatgacgtttacttccaggtgggcttattgaccaccattgggctatcggccaagaac
gccatcttgattgttgagttcgctaaggacttgatggataaagaaggcaaaggtttggtg
gaatcaaccttagaagcagtgcgtatgcgtctgcgtccaatcttgatgacctcactggcc
tttattcttggggttatgccgctggttattagtagcggtgcaggttctggtgcacagaat
gcggtcggtaccggtgtaatgggcggtatgataaccgcgacagtactggctatcttcttt
gttccggtattcttcgtggtggttcgccgccgctttagccggaaaagtgaagatgtagaa
catgcacatgcggttgaccataaggtgaaataa
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