Yarrowia lipolytica: YALI0D12364g
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Entry
YALI0D12364g CDS
T01033
Name
(RefSeq) YALI0D12364p
KO
K10981
DNA polymerase IV [EC:
2.7.7.7
]
Organism
yli
Yarrowia lipolytica
Pathway
yli03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
yli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
YALI0D12364g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yli03400
]
YALI0D12364g
Enzymes [BR:
yli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
YALI0D12364g
DNA repair and recombination proteins [BR:
yli03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
YALI0D12364g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
BRCT
BRCT_2
HHH_5
LIG3_BRCT
LIDHydrolase
Motif
Other DBs
NCBI-GeneID:
2910135
NCBI-ProteinID:
XP_502740
UniProt:
Q6C9C2
LinkDB
All DBs
Position
D:1536379..1538511
Genome browser
AA seq
710 aa
AA seq
DB search
MGPRATRNSSKNTEGAETASKDAQSQHNAASDTKQASKEVSSTATSPKVALKRQHRTAAS
TNSDESSSKPSTPTGSVTSTVESPRKAKKTDAVVEGEQPETTVKQEPDFESTVKIEPIEV
VKTEDPGHDIKVEDRDIKTEEDTKAGGNASREEIKNEYHSTPNLPLFHAITVMFIPLSKT
NKHRAELCSRHGGTVVTSYSDKVTHIIVANGVTVPQLMKTLGVDTLPASVTVVNENWFAD
CIEAGKIVGFGGKEVLGVPRGGDKRTAETTSDDTDAKKRRRASDAPSRSTTPPASPKSRS
ELRSDVSSDVIKARGKSMLEALHDVRMQDHAHAFASEWEDDGDDDADTDDDDADEPHKHK
KSQPQKQGDWVDNFLCMSGPERDPVDKNPNWKTIEVLSRLLKYYEDKHDQWRAQSYRKAL
NVLKRQPKKITTKKEAVKLPGIGDSIGSKIQEIVETNGLKLLNVTKLDTSVKVTSLFEGI
WGVGKATARKWYKEGYRTLDDIAKKATLTPNQKVGLEHYDDFQERIPRDEVTRHFMVVQK
AAHEIDPEVDAHIMGSYRRGAASSGDIDMIFTKKGATLDELQPFLKELVHKLTEQGFLKC
GLTGASTKWYGCSKLKDIPQWRRIDFLLVPWAEKGAAFIYFTGNVLFNRSIRLLANKKGY
SLNQHGLYAGVLRGERGSKLNDGYLVEGESEHKIFEILGVPYWEPWERNV
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgggacctagagcgaccagaaacagctccaagaacacagaaggcgctgagacagcgtcc
aaggacgcccaatcgcaacacaatgccgccagcgacacgaaacaagcctcgaaagaggtt
tcttcaactgccaccagtcccaaagttgctctaaaacgccaacatcgaactgccgcctca
acaaactcagacgagagttcaagtaaaccgtccacgccgaccggaagtgtgacttcgacc
gtggagtcgccccgaaaggccaagaagacagatgcggttgttgagggagagcagccagag
actaccgtcaaacaggagcctgactttgaaagtactgtcaaaattgagcccattgaggtt
gtcaagactgaggatccggggcatgacataaaggtggaggatagagatattaagactgaa
gaggacaccaaagctgggggaaacgccagcagagaagaaatcaagaatgaatatcactcg
acaccaaaccttccgctatttcacgcgattacagtcatgttcattcctctttcgaaaacc
aacaaacacagagcagaactgtgtagtcgtcatggtggcactgtggtcacctcctactcg
gataaagtgactcatattattgtggccaacggggtaacagttccccagctgatgaagact
ctgggagtggacactctgcccgcttccgtcaccgtggtcaacgaaaactggtttgctgac
tgcattgaagccggcaagattgtcggctttggtggtaaggaagtgcttggggtcccccga
ggtggagataagcgaactgctgaaaccacgtccgatgacacagacgcaaaaaagcgtcga
cgagctagtgatgctccctcaagaagcacaactcctccagcctcgcccaaatccaggtct
gaattgcgttcagatgtgtcttctgacgtgatcaaggcacgtggaaagtccatgcttgaa
gcgcttcacgatgtgcgtatgcaggatcacgcccatgcttttgcctcagagtgggaagat
gatggagatgacgatgctgacacagacgacgacgatgctgacgagccccacaaacacaaa
aagagccagccgcagaaacagggcgattgggtcgacaacttcctgtgcatgtctggaccc
gaacgggatcccgtggacaagaaccccaactggaagaccattgaggtgttgagtcgtctt
ttgaaatactatgaagacaagcatgatcaatggagagcccagagttacaggaaggcgttg
aatgttctgaaacgtcagccaaagaaaatcacaaccaaaaaggaggctgtcaagctgcct
ggtatcggtgattctatcggttcaaagatccaggagattgtggaaacaaacggtctgaaa
cttctcaatgtgaccaaactggatacctcagtcaaggttacttctctgtttgagggtatc
tggggcgtcggtaaggccacagcaagaaaatggtataaagaaggatatcgaactttggac
gatattgcgaagaaggccaccttgactcccaaccaaaaggtgggtcttgagcactatgac
gactttcaggaacgaattcctcgagatgaagtcactcgacactttatggttgtccaaaag
gcggctcatgagattgatccagaggtcgacgcgcatatcatgggctcgtacagacgtgga
gcggcttcttcaggagatatcgatatgatcttcaccaagaagggggccactctcgatgag
ctccaaccgtttctgaaggagctggttcataaactcacagaacagggtttcctcaaatgt
ggacttaccggcgcctctacaaagtggtacgggtgttccaaactcaaggatatcccccag
tggcgtcgaatcgactttctgcttgttccatgggccgagaagggcgctgccttcatttac
tttactggtaacgtactttttaaccgaagtatccggctgcttgccaacaagaagggctat
agtctcaaccagcatggtctgtatgcaggcgtactgcgaggagaacgggggtcgaaattg
aatgacggatacttggtggagggtgagagtgaacacaagatctttgagattttgggtgtg
ccttactgggagccgtgggagagaaatgtttaa
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