Yarrowia lipolytica: YALI0E21890g
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Entry
YALI0E21890g CDS
T01033
Name
(RefSeq) YALI0E21890p
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
yli
Yarrowia lipolytica
Pathway
yli03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
yli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
YALI0E21890g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yli03400
]
YALI0E21890g
Enzymes [BR:
yli01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
YALI0E21890g
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
YALI0E21890g
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
YALI0E21890g
DNA repair and recombination proteins [BR:
yli03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
YALI0E21890g
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
YALI0E21890g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
HIT
Motif
Other DBs
NCBI-GeneID:
2911961
NCBI-ProteinID:
XP_504247
UniProt:
Q6C515
LinkDB
All DBs
Position
E:complement(2583466..2584101)
Genome browser
AA seq
211 aa
AA seq
DB search
MSWKYALGQYIKSPEKFPNDVTLDTPDFVVIKDAFPKSHIHYLVLPKAVKPDTHPLKAFE
DDNLYEKTRAMVEKVEKMVAVEFIRTKGYSKDVKIQSGIHSVPSMNHVHVHVMTTDLSSP
RLKNRTHFNSFRTGFFVPFRTIPDLKVPSLDAWMVSQEKLIKGDIVVDGENFGNKFAKAK
RRLDEDFHKATIHGIPEEVEDDDYRVMEMIS
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgtcatggaaatacgcactaggtcagtacataaagagtcctgaaaaattccccaacgat
gtgactctcgacacaccagactttgtcgtgatcaaagatgcgttcccgaaatcacatatc
cattacctggtgttacccaaggctgtcaagcccgatacccatcctctaaaggcgtttgaa
gacgacaacctgtacgaaaaaactcgtgccatggtggaaaaagttgagaaaatggttgct
gtcgagttcattcgtacaaagggatactccaaggacgtgaagatccagtcaggcatccac
tcggtgcccagcatgaatcatgtccatgtccatgttatgacgacagatctgtcttctccc
cggctcaagaaccgcacacacttcaactcgttcaggactggcttttttgtgccattcaga
acgatcccggatctgaaagtcccaagtcttgacgcctggatggtctcacaggagaaactc
atcaagggggacattgtggtggatggagagaactttgggaacaagtttgcaaaggccaag
agaagactggatgaggatttccacaaagccacgattcacggtattccagaggaggtggag
gatgatgattatagggtgatggagatgatctcttaa
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integrated database retrieval system