KEGG   Yarrowia lipolytica: YALI0E21890g
Entry
YALI0E21890g      CDS       T01033                                 
Name
(RefSeq) YALI0E21890p
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
yli  Yarrowia lipolytica
Pathway
yli03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:yli00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    YALI0E21890g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:yli03400]
    YALI0E21890g
Enzymes [BR:yli01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     YALI0E21890g
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     YALI0E21890g
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     YALI0E21890g
DNA repair and recombination proteins [BR:yli03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     YALI0E21890g
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     YALI0E21890g
SSDB
Motif
Pfam: DcpS_C HIT
Other DBs
NCBI-GeneID: 2911961
NCBI-ProteinID: XP_504247
UniProt: Q6C515
LinkDB
Position
E:complement(2583466..2584101)
AA seq 211 aa
MSWKYALGQYIKSPEKFPNDVTLDTPDFVVIKDAFPKSHIHYLVLPKAVKPDTHPLKAFE
DDNLYEKTRAMVEKVEKMVAVEFIRTKGYSKDVKIQSGIHSVPSMNHVHVHVMTTDLSSP
RLKNRTHFNSFRTGFFVPFRTIPDLKVPSLDAWMVSQEKLIKGDIVVDGENFGNKFAKAK
RRLDEDFHKATIHGIPEEVEDDDYRVMEMIS
NT seq 636 nt   +upstreamnt  +downstreamnt
atgtcatggaaatacgcactaggtcagtacataaagagtcctgaaaaattccccaacgat
gtgactctcgacacaccagactttgtcgtgatcaaagatgcgttcccgaaatcacatatc
cattacctggtgttacccaaggctgtcaagcccgatacccatcctctaaaggcgtttgaa
gacgacaacctgtacgaaaaaactcgtgccatggtggaaaaagttgagaaaatggttgct
gtcgagttcattcgtacaaagggatactccaaggacgtgaagatccagtcaggcatccac
tcggtgcccagcatgaatcatgtccatgtccatgttatgacgacagatctgtcttctccc
cggctcaagaaccgcacacacttcaactcgttcaggactggcttttttgtgccattcaga
acgatcccggatctgaaagtcccaagtcttgacgcctggatggtctcacaggagaaactc
atcaagggggacattgtggtggatggagagaactttgggaacaagtttgcaaaggccaag
agaagactggatgaggatttccacaaagccacgattcacggtattccagaggaggtggag
gatgatgattatagggtgatggagatgatctcttaa

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