KEGG   Yersinia massiliensis: DA391_18645Help
Entry
DA391_18645       CDS       T05402                                 

Gene name
ddl
Definition
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
yma  Yersinia massiliensis
Pathway
yma00473  D-Alanine metabolism
yma00550  Peptidoglycan biosynthesis
yma01100  Metabolic pathways
yma01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:yma00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00473 D-Alanine metabolism
    DA391_18645 (ddl)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    DA391_18645 (ddl)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    DA391_18645 (ddl)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:yma01011]
    DA391_18645 (ddl)
Enzymes [BR:yma01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     DA391_18645 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:yma01011]
 Precursor biosynthesis
  Amino acid ligase
   DA391_18645 (ddl)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N CPSase_L_D2 ATP-grasp_4 ATP-grasp_3 ATP-grasp RimK TTL ATPgrasp_ST ATPgrasp_Ter ATPgrasp_YheCD
Motif
Other DBs
NCBI-ProteinID: AVX39505
UniProt: A0A2R4NTQ2
LinkDB All DBs
Position
complement(4013125..4014045)
Genome map
AA seq 306 aa AA seqDB search
MAEKVAVLLGGTSAEREVSLLSGQAVLAGLREAGIDAHGVDTKDFPATQLKEQGFDKVFI
ALHGRGGEDGTLQGVLEFLQLPYTGSGVMASALTMDKLRTKWVWQALDLPISPYVALNRQ
QFETLSSEELAARVAKLGLPLIVKPSHEGSSVGMSKVDHVSELQSALVEAFRHDTDVLIE
KWLSGPEFTVAILGEDVLPSIRIQAPGVFYDYEAKYLSDETQYFCPSGLSDALEQQLATL
ALQAYQALGCSGWGRVDVMQDSDGNFYLLEVNTSPGMTSHSLVPMAARQYGLSFSQLVAR
ILTLAD
NT seq 921 nt NT seq  +upstreamnt  +downstreamnt
atggctgagaaagttgcggtactgttggggggaacctctgccgaacgtgaagtgtcattg
ctatccggtcaggccgttttagccggcttgcgtgaagcaggtatcgacgcacatggcgtg
gataccaaagacttcccggccactcagcttaaagaacagggctttgataaggtctttatc
gccctgcatggtcgtggtggtgaagacggcaccttgcaaggtgttttggaattcctgcaa
ctaccttataccggtagtggtgtgatggcatcagccctgaccatggacaaattgcgcact
aaatgggtgtggcaggcattagatttacccatttccccgtatgttgcattgaatcgtcaa
cagtttgaaacactttcgtcagaggaattggcggcccgtgtcgctaagcttggcctgcca
ttaatcgtcaagccaagtcatgaaggctctagcgtgggcatgagcaaagttgatcatgtc
agtgagttacagagcgcgctggttgaagcgttccgccatgatactgatgtgttgattgaa
aaatggttgagcggcccagaatttactgtcgcgatcctcggcgaggatgttttaccgtcc
atccgtattcaagcgccgggcgtgttttatgattatgaagcgaagtatctgtcggatgag
acgcaatacttctgtccaagtggcctgagtgatgcgttagaacaacaactggcgacattg
gcattacaggcttatcaggcgctgggttgcagcggctgggggcgagtagacgttatgcaa
gatagcgacggcaatttttacttgcttgaagtgaatacgtcaccgggtatgaccagccac
agtttagtgccgatggcagcccgccaatatgggttgagtttctcccagttggtggcccga
attctgacgttggctgactga

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