Yersinia pestis Antiqua (biovar Antiqua): YPA_3604
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Entry
YPA_3604 CDS
T00369
Name
(GenBank) bacterial nucleoid protein HU alpha subunit
KO
K05787
DNA-binding protein HU-alpha
Organism
ypa
Yersinia pestis Antiqua (biovar Antiqua)
Brite
KEGG Orthology (KO) [BR:
ypa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ypa03032
]
YPA_3604
03036 Chromosome and associated proteins [BR:
ypa03036
]
YPA_3604
03400 DNA repair and recombination proteins [BR:
ypa03400
]
YPA_3604
DNA replication proteins [BR:
ypa03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
YPA_3604
Chromosome and associated proteins [BR:
ypa03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
YPA_3604
DNA repair and recombination proteins [BR:
ypa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
YPA_3604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
NA37
Motif
Other DBs
NCBI-ProteinID:
ABG15566
UniProt:
A0A0E1NTK9
LinkDB
All DBs
Position
complement(4041996..4042271)
Genome browser
AA seq
91 aa
AA seq
DB search
MNKTQLIDVIADKADLSKVQAKAALESTLAAITESLKEGDPVQLVGFGTFKVNHRNERTG
RNPQTGKEIKIAAANVPAFVSGKALKDAVKS
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaataagactcaactgattgacgtaatcgcggacaaagcggacctttctaaggtacaa
gctaaagctgctctggaatccacactggctgcaattaccgaatctctgaaagaaggggat
ccagtacaattggttggttttggtaccttcaaagtaaaccatcgtaatgagcgcactggc
cgcaacccacaaacgggtaaagaaatcaaaattgctgccgctaatgtacccgcgtttgtt
tctggtaaggcactgaaagacgctgttaagtcatag
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