Yersinia pestis Antiqua (biovar Antiqua): YPA_3870
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Entry
YPA_3870 CDS
T00369
Name
(GenBank) putative transcriptional repressor
KO
K11531
lsr operon transcriptional repressor
Organism
ypa
Yersinia pestis Antiqua (biovar Antiqua)
Pathway
ypa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ypa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
YPA_3870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ypa03000
]
YPA_3870
Transcription factors [BR:
ypa03000
]
Prokaryotic type
Other transcription factors
Others
YPA_3870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sugar-bind
Motif
Other DBs
NCBI-ProteinID:
ABG15831
UniProt:
A0A0H2YBZ4
LinkDB
All DBs
Position
complement(4359581..4360261)
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AA seq
226 aa
AA seq
DB search
MASLSISSRLGIGAAHLLMALIQPQQLLAVGFGETTMCALQHLSGFIASQQVRLVTLSGG
VGSYMTGIGQLDAACQVSIIPAPLRASNAHVADTFRQENSVRDVMLAACAADIAVVGIGS
VNQQKEATILRSGYISEGEQLMFSRKGAVGDILGYFIQADGALVPDMQIHQELIGISLAD
LTTIPTVIGVAGGVEKADVIVAALRGRYVNALVTDEVTARAIINLL
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
ttggcctccctcagtatcagtagccggttgggtattggtgccgcccatttattaatggcg
ctgatacagccacaacaacttttggccgttggtttcggtgagaccaccatgtgcgccttg
caacatttgagtggctttatcgcatcacagcaggtccgtttagtcacgttatccggcggt
gtcggctcctatatgacggggattggtcagttggatgcggcctgccaggtcagtatcatt
ccggccccgctgcgtgcctcaaatgcccatgttgccgacacgtttcgccaggaaaacagc
gtccgagatgtgatgctagccgcctgcgcggcagatattgcggtcgttgggatcggttcg
gttaatcagcaaaaagaagccacaattttgcgttcgggctatatcagcgaaggtgagcaa
ctgatgtttagccgtaaaggcgcggttggggatatcctcggttactttatccaagccgat
ggcgcgttggtgccagatatgcagattcatcaggagttgattggtatttcgttggctgat
ttaaccaccatcccaaccgtgattggtgtcgcagggggggtagaaaaagcggatgtgatt
gtcgcagcgctgcgggggaggtatgtgaatgcgttggtgacggatgaggtgacggcgcgt
gcaatcattaacttactttaa
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