KEGG   Yersinia pestis Antiqua (biovar Antiqua): YPA_3961
Entry
YPA_3961          CDS       T00369                                 
Name
(GenBank) Excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
ypa  Yersinia pestis Antiqua (biovar Antiqua)
Pathway
ypa03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ypa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    YPA_3961
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ypa03400]
    YPA_3961
DNA repair and recombination proteins [BR:ypa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     YPA_3961
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      YPA_3961
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_16 AAA_29 AAA_22 nSTAND1 RsgA_GTPase DnaJ_CXXCXGXG AAA_25 nSTAND3 NACHT AAA_23 T2SSE Viral_helicase1 cobW ScfRs ExoX-like_C
Other DBs
NCBI-ProteinID: ABG15922
UniProt: A0A0E1NT26
LinkDB
Position
4459221..4462064
AA seq 947 aa
MDNIEVRGARTHNLKNINLIIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC
PDHDVPLAAQTVSQMVDNVISQPEGRRLMLLAPVVKDRKGEHTKILENLAAQGYIRARID
GEVCDLSDPPKLELQKKHTIEVVVDRFKVREDLAQRLAESFETALALSGGTAVVADMDDP
HVEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQFFDPDRVLQNPEL
SLAGGAIRGWDRRNFYYFQMLRSLAEHYKFDIEAPFNSLDSAVQQAVLYGSGKDTIEFKY
INDRGDTTVRRHPFEGVLHNMERRYKETESSAVREELAKFISNRSCASCSGTRLRREARY
VFVENTTLPEISELSIGHALSFFQNMKLSGQRAQIAEKILKEIGDRLKFLVNVGLNYLSL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLETLIHLRNLGNT
VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGTVDDIMAAPASLTGQFLSGKRSIAI
PEKRVSADPSKVLKLIGATGNNLKDVTLTLPVGLFSCITGVSGSGKSTLINDTLYSIAQR
QLNGATITEPAPYREIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGVPE
SRTRGYTPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDIYVPCDHCKGKRYNRETLEVKY
KGKSIHEVLAMTIEEAREFFDAVPALARKLQTLIDVGLSYICLGQSATTLSGGEAQRVKL
SRELSKRGTGQTLYILDEPTTGLHFADIQQLLAVLHQLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGSGGGEILVSGTPETVAECAASHTARFLKPMLQRKPQTV
NT seq 2844 nt   +upstreamnt  +downstreamnt
atggataatattgaagttcggggcgctcgcacccacaatcttaagaatatcaacctgatt
atcccgcgcgacaaactgattgttgtcaccggcctatcaggttcaggcaaatcctcactg
gcttttgataccttgtatgccgaaggtcaacgccgttatgttgagtctctctccgcctat
gcacgccaatttctgtcgctgatggaaaaaccggatgttgaccatattgaaggcctgtct
ccggctatctctatcgagcaaaaatcaacctcccataacccacggtcaactgtcggtact
atcactgaaatccatgattacctgcgcttgctgttcgctcgagtcggcgagccgcgctgc
cctgatcatgatgtcccattagcggcgcaaacagtcagccaaatggttgataacgtgata
agccagccggaaggccgccgtctgatgctgttggcaccggtggtaaaagatcgcaaaggt
gaacacactaaaatactggaaaatctggccgctcaaggttacatccgggcgcggatcgat
ggcgaggtttgtgatctgtctgatccgcccaaattagagctgcaaaagaaacacaccatt
gaagtggtggttgaccgtttcaaggtacgcgaagatctggcgcaacgtttggcagaatca
tttgaaaccgcattggcgttatccggcggtaccgccgtggtagccgatatggacgatccg
catgtggaggagttattattttccgctaactttgcctgcccgatttgcggttacagcatg
agagagttggaaccacgcctgttctcctttaacaacccggcgggtgcctgcccaacgtgt
gatggcttgggtgtccagcagttttttgatccagaccgcgtgctgcaaaaccctgagctc
tctttagctggcggagcgattcgcggctgggatcgccgtaacttctattacttccagatg
ctacgttcactggccgagcattataaatttgatatcgaagcgccgtttaactcactggac
agcgccgtccagcaagccgtgctatacggttcaggcaaagataccatcgagttcaagtac
attaatgatcgcggtgatactaccgttcgccgccacccttttgagggggtgttgcacaat
atggaacgccgttataaagagacggaatccagtgcggtgcgcgaagagttagccaaattt
atcagcaaccgctcctgtgcgtcatgcagcggtacccgtctgcgcagagaggctcgttat
gtcttcgtggaaaacaccaccctgccagagatttctgaactgagcatcggccatgcactg
agtttcttccagaatatgaagctcagtggtcagcgtgcacaaatcgctgaaaagatactg
aaagaaattggcgataggctgaaattcctggttaacgtcgggctgaattatctgtcttta
tcccgatctgccgaaaccctgtccggtggcgaagcacagcgtatccgtctggctagccag
attggcgcgggtttggtcggcgttatgtatgtgctggatgagccgtctatcggtttacat
cagcgcgataacgaacgcttgctggagacattgattcacctacgtaatctgggtaacacc
gtgattgtggtggaacatgatgaagatgccatccgggccgcagatcatgtgattgatatc
ggccctggggccggcgtgcacggaggtgaagttgtcgccgaaggaacggtagatgacatc
atggccgcaccggcgtcactcacgggccagttcctcagcggtaagcggagcatcgccatc
ccagagaaacgggtcagtgctgatccgagcaaagtcttaaagctgataggggctacgggc
aataacctgaaagatgtcactctgacgctgcctgtcgggctattcagttgcatcaccggg
gtctccggctcggggaaatcgacgctgatcaacgatactttatacagtattgcccaacgc
caactgaacggcgcgaccatcaccgaacccgcaccataccgcgagatccaagggctagaa
catttcgataaagtcatcgacattgatcaaagcccgattggccgtacgccgcgttctaac
ccagccacctataccggcatctttacccccattcgcgagttatttgccggagtgccggaa
tcacgcacccgcggttatacgccaggccgtttcagttttaacgtcaaaggtgggcgctgt
gaagcctgccagggcgatggggtaataaaagtagaaatgcactttctgcctgatatttat
gttccttgcgatcactgtaaaggtaagcgttataaccgtgaaacgctggaagtaaaatat
aaaggtaaaagtattcacgaagttctggcgatgactattgaagaggcccgcgagttcttt
gatgccgtacctgctctggcacgtaagctgcaaaccctgatagatgttggcctgtcctat
atttgtctgggccaatcagccacaacgttatctggtggggaagcacagcgagtgaaacta
tcgcgcgaactgtcaaaacgcgggaccggccagacattgtatattctggatgagcctact
accggcctgcattttgccgatattcagcaactgctagcggtattgcatcagttacgggat
cagggcaataccattgtagtgattgaacacaatctggacgtaattaagacggcggattgg
attgtcgatctggggccagaaggcggcagtggtggcggtgaaattttggtctccggcaca
ccagagacggtggcggaatgcgcggcatcacacacggcacggttccttaagccaatgttg
cagcgtaagccacaaaccgtttaa

DBGET integrated database retrieval system