Alloyangia pacifica: CEW88_05755
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Entry
CEW88_05755 CDS
T05431
Name
(GenBank) RNA polymerase subunit sigma
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
ypac
Alloyangia pacifica
Brite
KEGG Orthology (KO) [BR:
ypac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ypac03021
]
CEW88_05755
Transcription machinery [BR:
ypac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CEW88_05755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
HTH_23
Sigma70_ECF
HTH_28
HTH_Tnp_1
HU-CCDC81_euk_2
MerR_1
HTH_36
HTH_29
Motif
Other DBs
NCBI-ProteinID:
AWI84616
UniProt:
A0A2U8HHV5
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All DBs
Position
1:1195399..1195902
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AA seq
167 aa
AA seq
DB search
MADRAAFARLYERTSAKLFGVCLRVLQDRTQAEEALQDTYVKLWNNAGSYRVNGYSPMTW
LITMARNAAVDRRRRSDVERAVQPIELDERLANPAPGPAEQAEARAEAAALALCMEELPP
DRAEMVRRAYLEGATYAELSEASGVKLNTVRTWLRRSLMALRDCLSR
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccgtgccgcctttgcacggctctacgagcgcacctcggcgaagctcttcggc
gtctgcctccgggtgctgcaggatcggacccaggccgaggaggcgctgcaggacacctac
gtgaagctctggaacaatgccggcagctaccgggtgaacggctattcgccgatgacctgg
ctgatcacgatggcgcgcaacgccgccgtcgaccgccgccgccgcagcgacgttgagcgg
gcggtgcagccgatcgagcttgacgagcggcttgccaatccggcgccgggccccgccgag
caggccgaggcgcgggcggaggcggcggcgctggcgctctgcatggaggaactgccgccc
gatcgcgccgagatggtccgccgcgcttatctcgagggggccacctatgccgagctgtcc
gaggcctccggggtcaagctcaacaccgtcaggacctggctgcggcgcagtctgatggcc
ctgcgggattgcctgagccgatga
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