KEGG   Alloyangia pacifica: CEW88_05755
Entry
CEW88_05755       CDS       T05431                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
ypac  Alloyangia pacifica
Brite
KEGG Orthology (KO) [BR:ypac00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ypac03021]
    CEW88_05755
Transcription machinery [BR:ypac03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CEW88_05755
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 HTH_23 Sigma70_ECF HTH_28 HTH_Tnp_1 HU-CCDC81_euk_2 MerR_1 HTH_36 HTH_29
Other DBs
NCBI-ProteinID: AWI84616
UniProt: A0A2U8HHV5
LinkDB
Position
1:1195399..1195902
AA seq 167 aa
MADRAAFARLYERTSAKLFGVCLRVLQDRTQAEEALQDTYVKLWNNAGSYRVNGYSPMTW
LITMARNAAVDRRRRSDVERAVQPIELDERLANPAPGPAEQAEARAEAAALALCMEELPP
DRAEMVRRAYLEGATYAELSEASGVKLNTVRTWLRRSLMALRDCLSR
NT seq 504 nt   +upstreamnt  +downstreamnt
atggccgaccgtgccgcctttgcacggctctacgagcgcacctcggcgaagctcttcggc
gtctgcctccgggtgctgcaggatcggacccaggccgaggaggcgctgcaggacacctac
gtgaagctctggaacaatgccggcagctaccgggtgaacggctattcgccgatgacctgg
ctgatcacgatggcgcgcaacgccgccgtcgaccgccgccgccgcagcgacgttgagcgg
gcggtgcagccgatcgagcttgacgagcggcttgccaatccggcgccgggccccgccgag
caggccgaggcgcgggcggaggcggcggcgctggcgctctgcatggaggaactgccgccc
gatcgcgccgagatggtccgccgcgcttatctcgagggggccacctatgccgagctgtcc
gaggcctccggggtcaagctcaacaccgtcaggacctggctgcggcgcagtctgatggcc
ctgcgggattgcctgagccgatga

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