KEGG   Yersinia pseudotuberculosis 1: BZ23_15
Entry
BZ23_15           CDS       T03679                                 
Symbol
hsdR
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
ypc  Yersinia pseudotuberculosis 1
Brite
KEGG Orthology (KO) [BR:ypc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ypc02048]
    BZ23_15 (hsdR)
Enzymes [BR:ypc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     BZ23_15 (hsdR)
Prokaryotic defense system [BR:ypc02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   BZ23_15 (hsdR)
SSDB
Motif
Pfam: SWI2_SNF2 EcoR124_C ResIII HSDR_N DEAD
Other DBs
NCBI-ProteinID: AJJ70175
LinkDB
Position
complement(16210..19458)
AA seq 1082 aa
MTTFKTEAQFEQAFIEVLTHKGWETEILNNKTEADLLQNWASILFENNRQRDRLNDVPLT
ATEMQQIIEQIKELKTPLKLNGLINGKTVAIKRDNPADTLHMGKEVSLKIYDRQEIAAGQ
SRYQIVQQPKFERGSPLRNDRRGDVLLLINGMPVIHLELKRSGTPVSQAVNQIEKYSKEG
VFSGLFSLIQVFVAMEPNEAKYFANPGLDGRFNPDYQFYWADFNNEPMNHWKDIASTLLS
IPMAHQLIGFYTVADDTDGVLKVMRSYQYYAANAISDKVAKTNWQQLGSAANNPDRLGGY
VWHTTGSGKTMTSFKSAQLIAQSKDADKVIFLMDRIELGTQSLTEYRNFAGDGEDVQATE
NTHVLITKLKSSATADTLIVSSIQKMSNIFEEVDDEGTATNSADIEKIRAKRLVFIIDEA
HRSTMSGGKENKEGMLVRIKKTFPKALFFGFTGTPIHDENQVNSNTTADVFGNELHRYSI
ADGIRDGNVLGFDPYKICTFKDKGLRQAVALEQAKADSVADAMSTAAKKKKFNYFMNDVL
MAGHKDATGKYIKGIEDYVPKEQYLTADHQEKVVEDILAEWDVLSQGNKFHAILATNSIA
EAIDYYRRLKAAKPELKVSALFDPNIDNDGSGDRGPTFKGDALDEIMADYNARYGQDFDF
ARHAAFKKDLAARLAHKKPYERIHTEPSKQLDILIVVDQMLTGFDSKWLNTLYLDKVIKY
QNIIQAFSRTNRLFGPDKPHGIIRYYRYPHTMEQYINDAVKLYSGDRPIGLFVDKLESNL
KAMNELVADITELFVSAGVENFEKLPDDIETCAQFAKLFNTFSQHLEAAKVQGLHWEQSV
YSPTENDVEHEVTLAIDEQTYLSLVLRYKELVAKGDGGGAGGGDVPFDISGYLTEIDTGK
IDADYMNSRFDKFLKELNQHQDPASIETTLNELHKSFASLTQSEQKYAKLFLHDLQRGDA
QLIEGHTFRDYINTYKDNAENAQLNAVVNALGLDKERLIALMADSVNDKNLNDFGRFDAL
KDSVNKSKAKIYFEKQDGVIIPPFKLNIRIDQFLKQFILAQTDDFLSDRDVVGDVMDIPP
SA
NT seq 3249 nt   +upstreamnt  +downstreamnt
atgaccacctttaaaaccgaagcgcaatttgagcaggcctttattgaagtactgacccat
aagggctgggaaacagagatactcaacaataaaaccgaagcggatttactgcaaaattgg
gcgtccattttgtttgaaaataatcgccagcgggaccgtttaaacgatgtgccgttaacc
gcgactgaaatgcagcaaattattgagcaaatcaaagaacttaaaaccccgctcaagctt
aatggtttaattaacggcaaaaccgtggccattaagcgcgataacccagccgatactttg
catatgggcaaagaagtcagcttaaaaatatacgatcgccaagaaattgcagccggccaa
agccgttaccaaattgtgcaacaacccaaatttgaacgcggcagccctttgcgcaatgac
cgccgcggcgatgtgctattactgatcaacggtatgccggtgatccatttagagctgaag
cgcagcggcactccggttagccaggcagtaaaccaaattgaaaagtacagcaaagagggt
gtatttagcggcctgttttcgcttatccaagtgtttgtggccatggagccaaacgaggcc
aaatactttgctaaccccgggctagacggcagatttaaccccgactatcaattttactgg
gccgattttaataacgaacccatgaatcactggaaagacatcgcctctaccttgctttct
atccctatggcgcaccagttgattggcttttataccgtcgccgacgataccgacggcgtg
cttaaagtgatgcgcagttatcagtattacgctgccaatgcaatatctgacaaagtggcc
aaaaccaactggcagcaactgggtagcgcggccaataaccccgatcgcctcgggggttat
gtgtggcataccaccggttcgggtaaaaccatgaccagctttaaatcggcgcagttgatc
gcacaatccaaagatgccgataaagtgatttttttaatggacaggattgaactgggcacc
cagtcgctcacggaataccgcaattttgctggcgatggcgaagacgtgcaagccaccgaa
aatactcatgtactcattaccaaattaaaaagcagtgcaactgccgatacgttaattgtt
agctctattcaaaaaatgagtaatatttttgaagaagttgatgatgagggaacagcaaca
aattcggccgacatagaaaaaattcgcgctaaacgtttggtgtttattattgatgaagcc
caccgctcgacgatgagtggaggcaaagaaaataaagaaggcatgttggtaaggattaaa
aaaacattccccaaggcactcttttttggttttaccggcacgccgattcatgatgaaaat
caagttaatagcaatactaccgctgatgtgtttggcaacgagctacaccgctacagcatt
gccgacggtattcgcgacggcaatgttttgggctttgacccttacaaaatctgtaccttt
aaagataaaggtttacgccaggccgtcgcccttgaacaggctaaggccgattcggttgca
gatgcaatgtctacggctgccaaaaagaaaaaatttaattattttatgaatgatgtgcta
atggctggccataaagatgcaacaggcaagtatatcaaaggcatagaagattatgtgcca
aaagaacaatatctcactgcagaccatcaagaaaaggtggtagaagatattttggccgag
tgggatgtgctcagccaaggcaataaatttcacgctattttagccactaacagcattgcc
gaagccattgactattaccgccgtttaaaagccgccaaacctgaacttaaagtatcggcc
ctatttgacccaaatattgataacgacggcagtggcgaccgaggccccacctttaaaggc
gatgctctggacgaaattatggccgactataacgcgcgttacggccaggattttgatttt
gcccgccatgcggcctttaaaaaagatttagcggcacgacttgcccataaaaagccttac
gagcgcatccataccgagccttcgaagcaattagatatactgattgtagtggatcaaatg
ctcactggctttgactctaaatggctcaataccttgtatttagacaaggtgattaaatac
caaaatattattcaagcgttctcgcgcaccaatcgcttgtttggccccgacaaaccccac
ggcatcatccgttattatcgttatccacacaccatggagcagtacattaacgatgcggta
aaactctattccggcgacagacctatcggcttatttgttgacaagttagaaagcaacctt
aaagccatgaatgaattagtcgcggacattaccgagctattcgtcagtgcgggtgttgag
aactttgaaaaactgccagacgatatagaaacctgtgcccaattcgccaaattatttaac
acctttagccaacacctggaagcggctaaagtacaaggtttgcattgggagcagtcggtc
tattcccctactgaaaatgatgtagaacatgaggtaacgctggctatagacgaacaaact
tacctgagcctggttctgcgttacaaagagttagtcgccaaaggtgatggtggtggcgca
ggtggcggcgatgtgccttttgatatcagtggttatttaactgaaatagataccggcaaa
atcgatgccgactatatgaacagccgctttgataaatttttaaaagagctgaaccaacac
caagaccctgcgagcattgaaaccacattaaatgagctacacaagtcgtttgcatcgctc
acccaaagcgagcaaaagtacgccaagctcttcttgcacgacttgcagcgcggcgatgcg
cagttaattgaaggccatacttttagagactatatcaacacctacaaagataatgctgaa
aatgcgcaattaaacgccgttgttaatgctcttggtttagataaagaacggctcatagca
ttaatggctgatagtgttaatgataaaaatctcaatgattttggtcgcttcgacgcatta
aaagattcagtaaataaatcgaaagccaagatctattttgaaaaacaagacggcgtaatc
atacctccatttaaattgaatatacgtattgatcagtttttaaagcagtttattttggca
caaacggatgatttcttaagtgacagagatgttgttggtgatgtgatggacatccctccc
tcagcgtaa

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