Yersinia pestis D106004: YPD4_2327
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Entry
YPD4_2327 CDS
T01832
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ypd
Yersinia pestis D106004
Pathway
ypd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ypd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
YPD4_2327 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ypd03400
]
YPD4_2327 (ung)
Enzymes [BR:
ypd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
YPD4_2327 (ung)
DNA repair and recombination proteins [BR:
ypd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
YPD4_2327 (ung)
Prokaryotic type
YPD4_2327 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ACY59234
LinkDB
All DBs
Position
2979006..2979692
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AA seq
228 aa
AA seq
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MSPSLTWHDVIGQEKEQPYFKDTLAYVAAERRAGKTIYPPQKDIFNAFRLTELDQVKVVI
LGQDPYHGPNQAHGLSFSVLPGVPAPPSLGNIYKELVTDIPGFQRPNHGFLQSWAEQGVL
LLNTVLTVEAGKAHSHANLGWETFTDKVIAALNEHREGVIFMLWGSHAQKKGRIINTERH
YILKAPHPSPLSAHRGFLGCKHFSQANQLLQQQNQQPIDWQPKLPAVE
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgtccccctcccttacttggcacgatgtaatcggccaagaaaaagaacaaccgtatttt
aaagatacgctggcctatgtggcagcagaacgccgtgcgggtaagaccatctatccacca
caaaaagatatatttaacgcttttcgcctgaccgaactggatcaagtaaaagtcgtcatt
ctggggcaagatccgtatcacggccccaaccaggctcatggattatcattttcggttcta
cctggtgttcctgcccccccttcattggggaatatatacaaggaactggtcactgatatt
ccaggattccagcgccctaaccacggttttttacaaagctgggccgagcaaggcgtttta
ttacttaatacggtcctgacggtagaagcgggcaaagcccactctcatgctaaccttggt
tgggaaacctttacggataaagtgattgctgcgttgaatgaacaccgagaaggtgtgatt
tttatgttgtggggatcacatgctcagaaaaaaggccgcattattaatactgagcgccat
tatattttgaaagcacctcatccatcacccttgtcagcacaccgtggttttctgggctgt
aagcacttttcgcaagctaatcaattactgcaacaacaaaatcagcagcctattgattgg
caacctaagctgccagcggtggagtaa
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