Yersinia pestis D106004: YPD4_3451
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Entry
YPD4_3451 CDS
T01832
Name
(GenBank) dihydrolipoamide dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
ypd
Yersinia pestis D106004
Pathway
ypd00010
Glycolysis / Gluconeogenesis
ypd00020
Citrate cycle (TCA cycle)
ypd00260
Glycine, serine and threonine metabolism
ypd00280
Valine, leucine and isoleucine degradation
ypd00310
Lysine degradation
ypd00380
Tryptophan metabolism
ypd00620
Pyruvate metabolism
ypd00630
Glyoxylate and dicarboxylate metabolism
ypd00640
Propanoate metabolism
ypd00785
Lipoic acid metabolism
ypd01100
Metabolic pathways
ypd01110
Biosynthesis of secondary metabolites
ypd01120
Microbial metabolism in diverse environments
ypd01200
Carbon metabolism
ypd01210
2-Oxocarboxylic acid metabolism
ypd01240
Biosynthesis of cofactors
Module
ypd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ypd_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ypd_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
ypd_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
ypd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
YPD4_3451
00020 Citrate cycle (TCA cycle)
YPD4_3451
00620 Pyruvate metabolism
YPD4_3451
00630 Glyoxylate and dicarboxylate metabolism
YPD4_3451
00640 Propanoate metabolism
YPD4_3451
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
YPD4_3451
00280 Valine, leucine and isoleucine degradation
YPD4_3451
00310 Lysine degradation
YPD4_3451
00380 Tryptophan metabolism
YPD4_3451
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
YPD4_3451
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ypd04147
]
YPD4_3451
Enzymes [BR:
ypd01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
YPD4_3451
Exosome [BR:
ypd04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
YPD4_3451
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox_3
GIDA
Pyr_redox
Lys_Orn_oxgnase
AlaDh_PNT_C
DAO
FAD_binding_2
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
ACY60355
LinkDB
All DBs
Position
4385992..4387455
Genome browser
AA seq
487 aa
AA seq
DB search
MKTLNVDVAVIGGGTAGLGAYRAAKLLTPNVVMIEGGEYGTTCARVGCMPSKLLIAAAEA
VHQIEKAPGFGIHPQGKPLINGREVMDRVKRERDRFVGFVLESVETIPAADKIQGYARFI
DDNTLQVDDHTQLTSQKIIAQRIVIATGSRPSWPASWNELGDRLIINDDVFNWDDLPESV
AVFGPGVIGLELGQALHRLGVQVKMFGVGGAVGPLTDSIVRDYAAKTLGDEFYLDPDVKV
ELMQREGDKVFIRYLDKSGRPQEIMVDYVLAATGRRPNVDKLGLENTSLILDERGVPQAD
RLTMQTNVPHIFIAGDASNQLPLLHEASDQARIAGVNAGGFPEVVPGLRRSPISVVFSDP
QIAMVGATFRELAQKFSACGCFEIGEVSFENQGRSRVMLKNKGILRIYGEQGTGRFLGAE
MMGPSAEHIAHLLAWAHQQQMTIDQMLDMPFYHPVIEEGLRTALRDLQSKLKLGADEAER
CLRCPGE
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccttaaacgttgatgtcgctgttattggcggcggaacggccggactgggcgct
tatcgcgcggccaaactgttgacccccaacgtagtgatgattgaaggtggtgaatatggt
accacctgcgcacgcgtcggctgcatgccatccaaactattgattgcggcggctgaagcc
gtccaccagatagaaaaagcgcccggatttggtattcacccacaaggtaagcccctgatt
aatggccgtgaagtcatggaccgcgttaagcgtgaacgtgaccgttttgtgggcttcgta
ttggaaagcgtagagaccattcctgcggccgataaaattcaaggttatgcccgttttatt
gatgataacaccctgcaagttgatgatcacacgcagcttacttcacaaaaaatcattgcg
cagcggatcgtgattgcgacaggttcccgcccaagctggcccgcctcttggaatgagcta
ggtgaccggttgattattaatgatgacgtctttaattgggacgatctgccagaatctgtg
gcagtttttggcccaggcgttattggcttagaacttggtcaggcactgcaccggttaggt
gtccaggtaaaaatgtttggtgtcggtggtgccgttggcccgctgaccgacagtatcgtg
cgtgactacgcagcaaaaacgttgggtgatgagttctatcttgatcccgatgtaaaagtt
gagctgatgcaacgtgagggagataaagtctttatccgttatctggataaaagcggtagg
ccacaggagattatggtggactacgtcttagccgccacgggccgccgccctaatgtagat
aaattggggctggagaatacgtcactcattctggatgaacgcggagtgccgcaggcagac
cgcctgaccatgcaaaccaacgtgccgcatatttttattgcaggtgatgccagcaatcag
ttgccattactgcatgaagccagcgatcaggcacgtattgccggtgtaaatgcgggagga
ttccctgaggttgtacccggtttacgccgtagcccaatttcagtcgtgttctctgaccca
caaattgccatggtgggggcaaccttccgtgagctagcacaaaaattcagcgcttgtggt
tgctttgagattggcgaagtctcctttgagaatcaaggtcgctcgcgggtgatgctaaaa
aacaaaggcattttacgcatttatggcgaacagggcactggccgattcttaggggcagag
atgatggggccaagtgcggagcacatcgcccacttactggcatgggcgcatcagcaacaa
atgaccatcgaccagatgctcgatatgccgttttatcatccggtcattgaagaaggcctg
cgtaccgcattgcgtgatttgcaatctaagttaaagctgggcgctgatgaagcggagcgc
tgcctacgctgccctggcgaataa
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