Yersinia pestis Harbin 35 (biovar Medievalis): YPC_3581
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Entry
YPC_3581 CDS
T01874
Symbol
rluD
Name
(GenBank) 23S rRNA pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
yph
Yersinia pestis Harbin 35 (biovar Medievalis)
Brite
KEGG Orthology (KO) [BR:
yph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
yph03009
]
YPC_3581 (rluD)
Enzymes [BR:
yph01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
YPC_3581 (rluD)
Ribosome biogenesis [BR:
yph03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
YPC_3581 (rluD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
TruB_N
S4_2
Motif
Other DBs
NCBI-ProteinID:
ADW00041
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Position
complement(3448525..3449502)
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AA seq
325 aa
AA seq
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MAQQVQLSATVAESQLGQRLDQALAELFPDYSRSRIKEWILDSRVTVNGKKINKPKEKVL
GGELVAIDAQIEEDARWAPQEIPLDIVYEDNDILVINKPRGLVVHPGAGNPDGTVLNALL
HYYPEIMDVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVEALQAREITREYEAVAIGNMT
AGGRVDEPISRHSTKRTHMAVHPMGKPATTHYRIMEHFRAHTRLRLRLETGRTHQIRVHM
SHINHPLVGDQLYGGRPRPPKGASDSFIAILRGFDRQALHATMLRLYHPIRGIQMEWHAA
LPEDMVELINALKADTEEFKDQMDW
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggcacaacaagtacaactcagcgcaacggtggccgaatctcaactcggtcaacggtta
gatcaggctttggccgaattgttcccagattattcaagatctcgcataaaagagtggatt
ttggatagtcgggttacagtcaatggtaaaaaaatcaacaagcctaaagaaaaagtgttg
ggtggtgagctcgtcgcaattgacgcgcaaattgaggaagatgcccgttgggcgcctcaa
gaaatcccacttgatatcgtgtatgaagataacgatattctggttattaataaaccccga
ggtttagttgttcatcctggtgctggcaatcctgatggcaccgtgctgaatgctttgctg
cattattatccagaaatcatggatgttcctcgcgcaggcattgtacatcgcttggataag
gacaccaccggattgatggtggttgcaaaaacagtcccggcacagacccgcttggttgaa
gcgttgcaagcacgtgaaattacacgtgaatatgaagcagtcgctatcggtaatatgacc
gctggcgggagagtggatgagccaatttctcgccactcgactaaacgcacccatatggca
gtacatccaatgggcaaaccggcgacgacacactaccgcattatggagcacttccgtgcc
catacccgtctgcgtctgcgtttggaaactggccgtacacaccaaatccgtgtgcatatg
tctcatattaaccatccgctggtgggtgatcagctctatggtggccgcccgcgtccgcct
aaaggggcgtctgattcctttattgccatcttgcgtggctttgatcgtcaggctctgcac
gcaaccatgctacgtttgtatcacccaatcagaggtattcaaatggaatggcatgccgca
ttaccagaagatatggttgagctgattaatgcgttaaaagccgatactgaagaatttaaa
gatcagatggattggtaa
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