KEGG   Yersinia pestis Harbin 35 (biovar Medievalis): YPC_4069
Entry
YPC_4069          CDS       T01874                                 
Symbol
ddlB
Name
(GenBank) D-alanine--D-alanine ligase B
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
yph  Yersinia pestis Harbin 35 (biovar Medievalis)
Pathway
yph00470  D-Amino acid metabolism
yph00550  Peptidoglycan biosynthesis
yph01100  Metabolic pathways
yph01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:yph00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    YPC_4069 (ddlB)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    YPC_4069 (ddlB)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    YPC_4069 (ddlB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:yph01011]
    YPC_4069 (ddlB)
Enzymes [BR:yph01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     YPC_4069 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:yph01011]
 Precursor biosynthesis
  Amino acid ligase
   YPC_4069 (ddlB)
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N CPSase_L_D2 ATP-grasp_4 ATP-grasp ATPgrasp_ST ATPgrasp_YheCD RimK TTL GARS_A
Other DBs
NCBI-ProteinID: ADW00495
LinkDB
Position
3938296..3939216
AA seq 306 aa
MAEKVAVLLGGTSAEREVSLLSGQAVLAGLKEAGIDAYGVDTKDFPVTQLKEQGFDKVFI
ALHGRGGEDGTLQGVLEFLQLPYTGSGVMASALTMDKLRTKLVWQALGLPISPYVALNRQ
QFETLSPEELVACVAKLGLPLIVKPSHEGSSVGMSKVDHASELQKALVEAFQHDSDVLIE
KWLSGPEFTVAILGDEVLPSIRIQPPGVFYDYDAKYLSDKTQYFCPSGLSDESEQQLAAL
ALQAYHALDCSGWGRVDVMQDRDGHFYLLEVNTSPGMTSHSLVPMAARQYGLSFSQLVAR
ILMLAD
NT seq 921 nt   +upstreamnt  +downstreamnt
atggctgagaaagtcgcggtattgctgggtgggacctctgcggagcgtgaagtgtcatta
ctgtcaggtcaggcggtattggcaggcttgaaagaagccggtatcgatgcttatggggtg
gataccaaagattttccggtaactcagcttaaagaacagggctttgataaagtgtttatc
gccctgcatggtcgtggtggcgaagacggtacgttacaaggcgtattggaatttctacaa
ctgccatataccggcagtggtgtaatggcatccgccctgacaatggacaaattgcgcacc
aaattagtctggcaagccttggggttgcctatttcgccttatgttgcgttgaatcgccaa
cagtttgaaacactttccccagaggaattggtggcgtgtgtcgctaagcttggcctgcca
cttattgtcaagccaagccatgaaggctctagcgttgggatgagtaaagttgatcacgcc
agcgaattgcagaaggcattggttgaagctttccaacatgacagcgatgtactgattgag
aaatggctgagcgggccagagtttactgtcgcgatccttggggatgaagttttgccttct
attcgtattcagcctccgggcgtgttttacgattatgacgctaagtatttgtcagataaa
acacaatacttctgcccaagcggtttaagtgatgagtcggagcaacaattggcagcgctg
gcattgcaggcttaccacgcgctggattgcagcggttgggggcgggtcgatgtgatgcaa
gaccgcgatggtcatttttacctgcttgaagtgaacacttcaccgggtatgaccagccat
agtttggttccaatggccgcccgccagtatgggttgagtttctcccaattggtggcgcgc
attctgatgttggctgactga

DBGET integrated database retrieval system