Yersinia pestis KIM10+ (biovar Mediaevalis): y3347
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Entry
y3347 CDS
T00092
Symbol
speC
Name
(GenBank) ornithine decarboxylase isozyme
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
ypk
Yersinia pestis KIM10+ (biovar Mediaevalis)
Pathway
ypk00330
Arginine and proline metabolism
ypk00480
Glutathione metabolism
ypk01100
Metabolic pathways
ypk01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ypk00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
y3347 (speC)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
y3347 (speC)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
y3347 (speC)
Enzymes [BR:
ypk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
y3347 (speC)
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AAM86897
UniProt:
A0A3G5L0W7
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All DBs
Position
complement(3689173..3691335)
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AA seq
720 aa
AA seq
DB search
MTLLKIATSARLASYVETQRGVVYLNQTDFTDVAAVVMSVEDANAGILSMLHDLGFAIPA
FIAVTAEQTVSADYLPLIKGVITLGEANKAFYNAQVEAAASEYQKNLLPPFFSTLKKYVE
MNNSTFACPGHQGGEFFRKHPAGRQFFEFYGETIFRSDMCNADVKLGDLLIHEGAAKDAQ
KYAAKVFNADKTYFVLNGTSAANKVVTNALLTRGDLVLFDRNNHKSNHHGALIQAGATPV
YLETARNPFGFIGGIDAHCFNEDYLRQQLREVAPERAEEARPFRLAIIQLGTYDGTVYNA
RQVVDSIGHLCDYILFDSAWVGYEQFIPMMKDFSPLLLELNENDPGIIVTQSVHKQQAGF
SQTSQVHKKDNHIKGQKRHCNHKRFNNAFMLHASTSPFYPLFAALDVNAKIHSGDSGRRM
WMDCVKLGIETRKSLLARCSMLRPFIPPVVGGKNWQDYATDVIANDARFFNFVPDERWHG
FEGYNQDQYLVDPCKLLLTTPGIDASTGRYTSFGIPAAILATFLRENGIVPEKCDLNSIL
FLLTPAENTAKMAHLVDMLVQFERYVEQDAKLCDVLPTIYRKNEERYHGYTLRQLCQEMH
DLYVSHDVKQLQKDMFRKASFPQVVMNPQDANIQFIRDNIELIPIAEAEGRIAAEGALPY
PPGVLCVVPGEVWGGAVQRYFLALEEGINLLPGFSPELQGVYIEKGDVSWRRIFGYVITQ
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgacactattaaaaatagcaacaagcgcccgcctggcttcttatgtagaaactcagcgc
ggagtggtgtacctcaatcagactgactttactgatgttgccgcggtggtaatgtcggtt
gaagatgcaaatgcgggtatattgtcaatgctgcatgaccttggttttgctattcctgcg
tttattgccgtgacggcagaacagacggtctctgctgattatttgcccttgattaaaggt
gtcattacgcttggtgaagcaaataaagctttttataacgctcaggtagaagctgccgcc
agtgaatatcaaaagaatctcttaccgccttttttctcaacactgaaaaaatatgtcgag
atgaataactcgacctttgcttgccctggccatcaggggggcgaattttttcgcaagcat
cctgcaggacgccagttttttgaattctacggtgagacgatttttcgttcagatatgtgt
aatgccgatgtcaaattaggtgatttacttatccatgaaggggcggcaaaagatgcacag
aaatatgctgctaaggtattcaatgccgataaaacctattttgtcctgaacggtacctcg
gcggccaacaaggtcgtgaccaacgctttactgacccgtggtgatttagtgttgtttgac
cgcaataaccataaatctaaccatcatggtgcgctgatccaggcgggcgcgacgccggtt
tatctggaaacggcccgtaacccctttggttttattggtggtattgatgcgcactgcttc
aatgaagattatttacgtcaacaactgcgtgaagttgctcccgagcgtgcagaagaggct
cggccattccgattagcgatcattcaattgggtacctacgacggtacggtatataacgcc
cgccaagtagttgatagtattggtcatttatgcgattacattttgtttgattctgcttgg
gtgggttacgaacaatttattccgatgatgaaggatttctcaccgttattactggaatta
aatgaaaatgaccctgggattattgtgactcaatcggtacacaagcagcaggccggtttt
tctcagacctctcaggtacataaaaaagataatcacattaaaggacagaaacgtcactgt
aaccataagcgttttaataatgcctttatgttgcatgcatcgaccagtccgttttatcca
ttatttgcggcattggatgttaatgccaaaatacactctggtgacagtggccgccgtatg
tggatggattgtgtaaaactcggtattgaaacccgtaaatcgttattggcacgctgttcg
atgttacggccttttattcctccagttgttggcggtaaaaattggcaagattatgctact
gatgtgattgccaatgatgcgcgcttctttaattttgtcccagatgaacgctggcatgga
tttgagggatataaccaagatcagtatttggttgatccgtgcaaattattgctgacgacg
ccgggaattgatgccagtactggccgatatacttcgtttggtattccggcggctattttg
gcgactttcctgcgtgaaaatggaattgtgccagaaaaatgtgatcttaactcgatccta
ttcctgctgaccccggcagaaaataccgccaaaatggcacacctggtggatatgttggtg
cagtttgaacgctatgttgaacaagatgcgaagctgtgtgatgtattaccgacgatctat
cgtaagaatgaagagcgttatcacggttataccttgcgtcagttatgccaagaaatgcat
gacctgtacgtcagccatgacgttaagcaattgcaaaaggatatgttccgtaaagccagt
ttcccgcaggtagtcatgaacccgcaagacgccaatattcagtttatccgcgataatatt
gagttgattcctattgctgaagctgaaggccgtattgccgccgaaggcgctttgccttat
ccaccgggtgtgctgtgtgtggtgcccggtgaagtgtggggtggggcggttcagcgttat
tttctggcgctggaagaggggattaacttactgccgggcttttcacctgagttacagggc
gtttatatcgaaaaaggtgatgtgtcttggcggcgtatctttggttatgtgattacgcaa
tag
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