Yersinia pestis El Dorado: CH46_317
Help
Entry
CH46_317 CDS
T03719
Name
(GenBank) hemagluttinin repeat family protein
KO
K15125
filamentous hemagglutinin
Organism
ypl
Yersinia pestis El Dorado
Brite
KEGG Orthology (KO) [BR:
ypl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ypl00536
]
CH46_317
Glycosaminoglycan binding proteins [BR:
ypl00536
]
Heparan sulfate / Heparin
Microbial pathogens
CH46_317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fil_haemagg_2
PT-VENN
Motif
Other DBs
NCBI-ProteinID:
AJJ16499
LinkDB
All DBs
Position
complement(348330..352682)
Genome browser
AA seq
1450 aa
AA seq
DB search
METHPAFASLNNWKGSDLYLQQLSSDPSVIHKRLGDNAYEQRLLRDQVLALTGRTVASDY
RSEQAQFEQLFAAGVQYSKAFNLAPGTRLSAEQMATLTGNIVLMENRDVAGQTVLVPVVY
LAGVKPGDLRANGALIAAENISLTEVQGFANAGAISASNNLQISMAKDITLNNRCGLLQA
GNHLQLSTLNSDIDLTSARLNATNLQLDSGRDVILRTASDQYSSGNGAVQRTQTILGPLA
SLNISNNAVITAQRDFIQQGAGINIGKDLQVNTGGDWLLSTVQRSDQISAQYGGGSATSG
SLRHLGSEVKVGGALSANVDNLTAVGARVNAGTIDVRAQNITLSAATDSLSVTGGSSSKR
HTSSVNLYDETLLGSQLNATGDINLQTVNDITLSASAVQTDGALKLAAGGDVTLTSQTEQ
HDEQRNHTGTKKGLLSSTTTRSEEGRSQTLAVGSMLSAGSIDVSSQNIAVAGSSVVADKD
IRLRAQENLTVSTAQQSESGSQLFEQKKSGLMSTGGIGVFIGTSRQKTTDQTQTVSHVGS
TVGSLTGNVRLEAGNQLTLHGSDVVAGKDLALTGADVAISAAENSRSQQYTAESKQRGLT
VALSGPVGSAVNTAVTTAKAAREENTGRLAGLQGVKAALSGVQAVQAGQLVQAQGGGITE
MVGVSVSLGSQKSSSQQQQEQTQVSGSALTAGNNLSIKASGSDILIAGSQLKAGGDTRLD
AARDVQLLGAANRQKTDGSNSSRGGSVGVSVGGSGLSVFANANKGQGNERGDGTFWTETT
VDSGGMFSLRSGRDTALTGAQVSAETVKADVGRNLTLQSQQDRDNYDAKQSRASGGISVP
VAGGGAAVNLSMSRDRLSSQYDSVQAQTGIFAGSGGVDIRVGEHTQLDGAVIASTAAADK
NTLDTGTLGFSDIKNKAVFTVEHQGGSLSTGGPVGSDLLSNLGGMVLAGLGNGGYAEGTT
QAAVSEGTITVRDTENQQQNVDDLSRDTGNANGSIGPIFDKEKEQNRLKEVQLIGEIGGQ
ALDIASTQGKIIATHAANDKMKAVKPEDIAAAEKQWEKAHPGKAATAEDINQQIYQTAYN
QAFNESGFGTGGPVQRGMQAATAAVQGLAGGNMGAALTGASAPYLAGVIKQSTGDNPAAN
TMAHAVLGAVTAYASGNNALAGAAGAATAELMAPTIISALGWDKNTLTEGQKQAVSALST
LAAGLAGGLTGDSTADALAGGQAGKNAVENNLLGGNEFTHTQFVQKHGADVLSCADNPSN
AACQRGIAENKAYIAALATGSVALLPGSSQAMWALGAGTNAGMQYADNGKINPVNSVAAG
WINVITMGQGWKGTIAWNAAGGALINAINGGDPLTGAITNGTGAGFGYGVGNYVVKPAAN
TLGKWITGGWNPKFDPNLLKYAEVKGQLGISKEMLPSKIPSAVGNAGGSLSSEFGSSLIQ
QKKDAMEDSK
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
gtggagacccatccggcgtttgccagcctgaataactggaaagggtcggacctctatttg
cagcaactgagcagcgatccttcggtgatacacaaacggctgggggataacgcctatgaa
cagcggctgttacgggatcaggtgctggcgttgacggggagaacggtggccagtgattac
cgtagcgaacaggcgcagttcgagcagctctttgccgccggcgtccagtacagcaaagcg
ttcaatctggcaccgggtacgcgcctcagtgcggagcagatggcaaccttaaccggcaat
atcgtgctgatggagaaccgtgacgtcgccgggcaaaccgtattagtccccgtggtctat
ctggcgggggttaaaccgggcgatctacgtgctaacggggcattgattgcggcggagaat
atcagcctgaccgaggtacaggggttcgccaatgcgggggcgatcagcgccagtaataac
ctgcaaatcagcatggcgaaagacatcaccctgaacaaccgttgcggcttgcttcaggcg
ggtaatcacctgcaactcagcacgctgaacagcgatattgacctgaccagcgcgcgactc
aatgccactaacctgcaactggacagcggccgcgatgtgatcctgcgtaccgccagtgat
cagtacagcagcggtaacggtgcggtgcagcggacacaaacgatcctcgggccgctggcg
agcctcaatatcagtaataacgcggtgatcacagcccaacgcgattttatccagcagggc
gcgggcatcaatattggcaaggatctccaggtgaacaccggtggcgactggcttctcagc
acggtgcaacgtagcgaccagatcagtgcgcagtatggcggcggcagtgcgaccagtggc
tctctccgccatctgggcagcgaggtgaaggtcggtggtgcgctaagcgccaacgtagac
aatttgaccgccgtgggggcgcgggtgaatgccggtaccatcgatgtgcgggcgcagaat
atcactctcagcgcggccactgacagcctgtctgttaccggtggatcctcgagcaaacgc
cataccagctcggtcaatctctatgatgaaacgctcctcggcagccagttgaacgccacg
ggcgatatcaatttgcagacagtaaacgatatcaccctcagtgccagcgcggtgcaaacg
gatggcgcgttgaaactagcggcgggtggcgatgtcactctcacctcccagaccgaacag
catgacgagcagcgcaatcataccgggactaaaaaagggctgctctccagcaccaccacc
cgcagcgaagagggccggagccagacgctggcggtgggttcgatgctctcggcgggttcc
attgatgtcagtagccaaaatatcgcggtcgcgggcagcagcgtggtggccgataaggat
attcgcctgcgtgcgcaggaaaacctgaccgtgagcaccgcgcagcagagcgagagcggg
tctcagctattcgagcagaaaaaatccggcctgatgagcaccggcggtatcggtgtcttt
atcgggacttcccggcagaaaaccaccgaccagacccaaacggtgagccatgttggcagc
acggtgggcagcctgacgggcaatgtgcgtctcgaggcgggcaatcagttaacccttcac
ggcagcgacgtggtggcgggtaaagacctcgccctgacaggggcggatgtcgcgatcagc
gccgcagaaaatagccgttctcaacagtatactgccgagagtaaacagcgtggcctgacg
gtggcgctgtccggaccggtcggcagtgccgtcaatacggcggtcaccaccgccaaagcg
gcccgagaagaaaacaccggccggctggcgggattacaaggggttaaagcggcgctgtcg
ggggtgcaagcggtgcaggccgggcaactggtgcaggcccagggaggcggtatcactgag
atggtgggcgtcagtgtgtcgttaggctcacagaaatcgtcctcgcagcaacagcaggaa
cagacccaggtgagcggttcggccctgacggcgggtaataacctgagcatcaaggcctcc
ggtagcgatattctgatcgctggcagccagcttaaggccgggggcgatacccggcttgat
gcggcgcgtgacgtgcagttactcggcgcggccaataggcaaaaaaccgacggtagcaac
agcagccgtggcggtagcgttggcgtcagtgtggggggcagcggtctgagcgtctttgcc
aatgccaacaaggggcagggcaatgagcgcggtgacggcactttctggacggaaaccacc
gtcgacagtggcggaatgttctcgttgcgcagcggtcgcgatacggcactgaccggcgcg
caggtcagcgctgaaacggtcaaggccgatgtggggcgtaatcttactctgcaaagccag
caggaccgcgataattatgatgcgaagcagagccgtgccagcggcggtatcagtgtcccg
gtggcggggggcggtgccgcggtcaacctgagcatgagccgtgacaggttatccagtcag
tatgactcggtgcaggcgcagacgggtatttttgccggttctggcggtgttgatatccgg
gtgggtgagcacacccagttggatggcgcggtgattgccagcacggcggcagccgataaa
aacacgctggataccggcacactgggcttcagtgatatcaaaaataaagcggtattcacg
gtggagcatcagggcggcagcctgagcaccggtggcccggtggggtcagacctgctgagt
aatctgggcggtatggtgctcgcggggctgggcaatggcggatatgccgaaggcaccacg
caggcggcagtgagtgagggcacgattaccgttcgcgacacggagaatcaacagcagaat
gttgatgacctgagccgggacaccgggaatgccaacggcagtatcgggccgatttttgat
aaagagaaagagcagaaccggctgaaagaagtgcagctgattggcgagataggcggtcag
gcgttagatattgcctccacgcagggcaagataattgccactcacgcggcaaacgacaag
atgaaggcggtgaagccggaagatatcgccgcggcggaaaaacagtgggagaaagcccat
ccgggcaaggcggccacggcagaggacatcaaccagcagatttaccagacggcatataat
caggcatttaacgagtcaggatttgggacaggcggcccggtgcaacgcgggatgcaggcg
gcgacagccgccgtgcaggggctggctggcgggaatatgggtgcggccctgacgggtgcc
agtgcgccgtatctggcgggggtgattaagcaaagtacaggcgataatccggcggctaac
acaatggcacacgccgtattgggcgcggtgacggcctatgccagcggcaacaatgcgctg
gcgggtgcggctggcgcggccacggcggagttgatggcccccacgattatcagcgcgctg
gggtgggataagaacacactcactgaaggtcagaaacaggctgtcagcgcactgagtaca
ttagccgccgggctggccggtggtttgacaggtgacagcacagcggatgcgctagccggg
gggcaggcggggaaaaatgcggtagagaataacttgctgggtggtaatgaattcacacat
acccaattcgttcaaaagcatggtgctgatgttttgtcctgtgcagataacccatcaaat
gctgcttgccagcgagggatcgcagaaaataaagcgtatatagcagcactggctacaggc
agtgtagctctattacccggaagttcgcaggcaatgtgggcacttggtgctggaacaaat
gccgggatgcagtatgcagataacggtaaaataaatccggttaactcagtggcagcaggc
tggataaatgtgataaccatggggcagggctggaaaggtacaatagcctggaatgcggca
ggtggagcattaatcaatgctataaacggtggcgatcctcttactggggcgataacaaat
ggaacaggggctgggtttggatatggagttggaaactatgtggtgaaacctgctgccaat
acacttggtaagtggataaccggtggctggaatcctaaattcgatcctaatttactgaaa
tatgctgaagttaaaggtcagttaggtatttccaaggaaatgttgccgagcaagatccct
agtgctgtggggaatgcaggtggtagtttatcatctgagtttggaagctccctcatccaa
caaaagaaagatgcaatggaggacagtaaatga
DBGET
integrated database retrieval system
