KEGG   Yersinia pestis Nepal516 (biovar Antiqua): YPN_0393
Entry
YPN_0393          CDS       T00370                                 
Name
(GenBank) DNA damage-inducible DNA polymerase II
  KO
K02336  DNA polymerase II [EC:2.7.7.7]
Organism
ypn  Yersinia pestis Nepal516 (biovar Antiqua)
Brite
KEGG Orthology (KO) [BR:ypn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ypn03400]
    YPN_0393
Enzymes [BR:ypn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     YPN_0393
DNA repair and recombination proteins [BR:ypn03400]
 Prokaryotic type
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    YPN_0393
SSDB
Motif
Pfam: DNA_pol_B DNApolII_N DNA_pol_B_exo1 DNA_pol_B_2 RNase_H_2 GGDEF_2
Other DBs
NCBI-ProteinID: ABG16725
UniProt: A0A0H2YFT7
LinkDB
Position
complement(479517..481886)
AA seq 789 aa
MGQTRQGFLLTRHWRDTPAGTEVEFWLATDEGPQHVRLPPQPSVAFIPAEQQQRAETVLR
AERHWQLRPLALTDFHQRPVLGLYCTQHRQLIRLEKRLRESGVNVYEGDIRPPERFLMER
FITAPVWFSGQENDHGPLLNTQLKPADDYRPTLKLVSLDIETSEHGELYCIGLEGCGQRQ
VYMLGPPNGETTGTPLDFNLEYVASRPLLLEKLNQWLAVHDPDAIIGWNLVQFDLRVLQK
HADRYQIPLRFGRGGNLLEWREHGFKQGHFFASAAGRLIIDGIEALKSATWNFPSFSLES
VSQTLLGEGKASDSPYQRMDEINQRFAHDKPALARYNLKDCELVTRIFAKTELLSFLLER
STVTGLAADRSGGSVAAFTHLYLPRMHRIGYVAPNLGELPEEHSPGGFVMDSQPGLYDSV
LVLDYKSLYPSIIRTFLIDPVGLVAGMQQPDIQHSVPGFRGAWFSREKHCLPAIVNQIWQ
GREAAKRQQNKPLSQALKIIMNAFYGVLGSSGCRFFDPRLASSITLRGHEIMRQTRELIE
AQGYQVIYGDTDSTFVWLKSAHNDEQATRIGNELVQLVNQWWQNHIQQNFNLPCALELEF
EIHYRRFLMPTIRGAEQGSKKRYAGLISTPTGDQMVYKGLETVRTDWTPLAQQFQRELYL
RIFQQQPYQDYVRDYVARTLNGELDEQLVYRKRLRRRLDDYQRNVPPHARAARLADEFNR
KLGRPLQYQNGGWISYVMTTAGPEPLETRQSPIDYDHYLTRQLQPVADAILPFTQDDFTT
LITGQMGLF
NT seq 2370 nt   +upstreamnt  +downstreamnt
gtggggcaaacccgtcagggcttcctgctgacccgccactggcgggatacaccagcaggc
accgaagtcgaattctggttggcaacggatgaagggccacagcatgtcaggctgccgccc
cagccatcggtcgcctttatccctgccgaacaacagcaacgggcagaaaccgtactacgc
gcagaacgccattggcaactgcgccctctcgcgctgactgattttcaccaacgcccggtt
cttggcctgtattgcactcagcaccgccagttgatccgcctggaaaaacgactgcgcgaa
agtggcgtgaatgtttacgaaggtgatattcgcccgccagaacgctttctgatggagcgg
tttattactgcccccgtatggtttagtgggcaggaaaatgaccatggcccactcctcaat
acacaactaaaaccggctgatgactatcgcccaaccctcaaactggtttctctggatatc
gaaaccagtgaacacggcgagctgtactgtattgggctggaaggctgtgggcaacggcaa
gtctatatgttagggccacccaatggggagaccacgggcaccccgctcgatttcaatttg
gaatacgttgccagccgcccattactattagaaaaactcaaccaatggctggcagtgcat
gatcctgatgccattattggctggaatctggtgcagttcgatttacgggtattacagaaa
cacgcagatcgctaccagatcccgctgcgctttggccgtggcggtaacctgctcgagtgg
cgtgaacacggctttaagcaagggcatttctttgcttccgccgccgggcgtttaattatt
gatggtattgaagcactgaaatccgccacgtggaacttcccttctttcagtctggaatct
gtctcgcaaactttacttggcgagggtaaagccagcgatagcccctatcagcggatggat
gaaattaatcagcgcttcgcccacgataaaccagcactggcccgttataacctgaaagac
tgtgagttggtcacgcggatttttgccaaaacggagttgctgagtttcttacttgaacgc
tcaaccgtgaccgggctggcagccgatcgtagtggcggttcggtggccgcgtttacccac
ctttatctgccacggatgcaccgtatcggctatgttgcccccaatttaggtgaattgccg
gaagagcacagccccggtggttttgtaatggattcccagcccggtttgtatgattcagtg
ctggtacttgactataaaagcctgtacccatcgattatccgcacctttttaatcgatccg
gtcggtctggtggcggggatgcagcaacctgatattcagcactcggtaccggggtttcgt
ggggcctggttctcacgcgagaaacattgtctgcccgccattgttaaccaaatctggcaa
gggcgggaagcagcgaaacgccagcaaaataagccgctgtcacaggcgctgaaaatcatt
atgaatgccttttatggcgtgctgggttccagcggctgccgttttttcgatcctcggctg
gcatcatccattaccctgcgtggtcatgagatcatgcgacaaacccgtgagttaattgaa
gcgcagggttatcaggtgatttatggtgacaccgattcaacctttgtttggctgaaaagc
gcccacaacgatgagcaagcaacacgcatcggtaacgagctggtgcagttagtgaatcaa
tggtggcaaaaccatatacagcaaaactttaatctgccctgtgcattagagctggagttc
gaaatccactaccggcgttttttgatgcccactattcggggcgcggagcaaggcagtaaa
aaacgctatgcgggactcatctccaccccgacgggtgatcaaatggtttataaagggctg
gaaaccgtccgtaccgattggaccccactggcacagcaattccagcgcgagctgtatctg
cgtatcttccaacaacaaccgtatcaagattatgtgcgggattacgtagcccgtaccctg
aatggcgagttggatgagcaactggtttaccgcaaacgcctgcgtcggcggttggatgac
tatcagcgcaacgtccccccgcacgccagagcggcacgtctggccgatgagtttaaccgt
aagcttggccggccactgcaatatcaaaatggcgggtggatcagctatgtgatgaccacc
gcaggccccgaacctttagaaacgcggcaatcgcccatcgattatgatcactatctgaca
cgccagctacaacccgtagcagacgctatacttcccttcactcaggatgatttcaccaca
ctgatcaccggtcagatgggacttttttaa

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