KEGG   Yersinia pestis Nepal516 (biovar Antiqua): YPN_1093
Entry
YPN_1093          CDS       T00370                                 
Name
(GenBank) DNA polymerase III, delta subunit
  KO
K02340  DNA polymerase III subunit delta [EC:2.7.7.7]
Organism
ypn  Yersinia pestis Nepal516 (biovar Antiqua)
Pathway
ypn03030  DNA replication
ypn03430  Mismatch repair
ypn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ypn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    YPN_1093
   03430 Mismatch repair
    YPN_1093
   03440 Homologous recombination
    YPN_1093
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ypn03032]
    YPN_1093
   03400 DNA repair and recombination proteins [BR:ypn03400]
    YPN_1093
Enzymes [BR:ypn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     YPN_1093
DNA replication proteins [BR:ypn03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     YPN_1093
DNA repair and recombination proteins [BR:ypn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     YPN_1093
SSDB
Motif
Pfam: DNA_pol3_delt_C DNA_pol3_delta DNA_pol3_delta_C
Other DBs
NCBI-ProteinID: ABG17424
UniProt: A0A0H2YFG9
LinkDB
Position
complement(1255287..1256321)
AA seq 344 aa
MIRIYPEQLVAQLHEGLRACYLLCGNEPLLLQESQDHIRRVASQHDFTEHFSFALDAHTE
WEHIFSLCQALSLFASRQTLLLSFPDSGLTAPISEQLVKLSGLLHPDILLILRANKLTKA
QENSAWFKALSKNGVFVSCQTPEQAQLPRWVSARAKSLNLNVDDAAIQLLCYCYEGNLLA
LSQALERLSLLYPDGKLTLPKVEQAVNDAAHFTPYHWLDALLMGKSKRAWHILQQLQQED
SEPVILLRTVQRELLLLLALKRQMEQVPLRALFDQHKIWQNRRPMMTQALQRLSLQQLQQ
AVHLLTQMEIRLKQDYGQSIWPELETLSMLMCGKTLPESFFDAH
NT seq 1035 nt   +upstreamnt  +downstreamnt
atgatccggatttaccctgaacaacttgtcgcgcagctccatgaggggctacgcgcttgt
tatctattgtgtggcaatgaacccttgttgctacaggaaagtcaggaccacattcgtcgg
gtggcatcgcagcacgatttcactgagcatttcagctttgcgttggacgcgcacaccgaa
tgggagcatatttttagcctttgccaggcactgagtttgttcgccagccgccagacactg
ctgctgagtttcccagacagtgggctgaccgcgccaattagcgagcagttggttaaatta
tctggcctgttacacccagacattttattgatattgcgggcgaataagttgaccaaagcg
caagagaacagcgcctggtttaaagctctcagtaaaaatggggtatttgtcagttgccag
acaccagaacaggcccagcttccccgctgggtgagcgctcgcgccaagagcctcaacttg
aacgtagacgatgccgccattcaattactttgctactgctatgaaggtaacttgctggcc
ttatctcaggcgttagaacggctctcgctgctctaccccgacggtaagttaaccctgcct
aaagtagaacaagccgtcaacgacgctgcgcatttcacaccataccattggcttgatgcc
ttgttgatggggaagagcaagcgggcttggcatattttgcagcaattacagcaagaagac
agtgaacccgttattttactgcgtaccgtacaacgtgaactgctcctgctgttagcgctc
aaacgtcagatggaacaagttccattgcgcgcattattcgatcaacacaaaatttggcag
aaccggcggcccatgatgactcaggcactgcaacggctctcccttcagcaactgcaacag
gcggttcatctgctcacacagatggaaatccggctgaaacaggattatggtcaatcaatc
tggcctgagttagaaacgctatctatgctgatgtgtggaaaaacattacctgagagcttt
tttgatgcccattaa

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