Yersinia pestis Nepal516 (biovar Antiqua): YPN_3305
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Entry
YPN_3305 CDS
T00370
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ypn
Yersinia pestis Nepal516 (biovar Antiqua)
Brite
KEGG Orthology (KO) [BR:
ypn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ypn03019
]
YPN_3305
03009 Ribosome biogenesis [BR:
ypn03009
]
YPN_3305
Messenger RNA biogenesis [BR:
ypn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
YPN_3305
Ribosome biogenesis [BR:
ypn03009
]
Eukaryotic type
Pre-60S particles
RNases
YPN_3305
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ABG19632
UniProt:
A0A0H2YKN6
LinkDB
All DBs
Position
complement(3767590..3768273)
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AA seq
227 aa
AA seq
DB search
MFACHLLATPSSLDISLVATKRTMIHIILLINRLFGCSPGLQIGNIMAENQNNLIWIDLE
MTGLDPERDRIIEIATLVTDANLNILAEGPVLAVHQSAEQLGLMDEWNVRTHTGSGLVER
VKASPFNDRDAELQTIEFLKQWVPAGVSPICGNSVGQDRRFLFRYMPELEAYFHYRYVDV
STLKELARRWKPEILAGFKKQNTHQALDDIRESVAELAYYREHFIQS
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcttgccacctgcttgcaacgccaagttctttggatatatcgctcgttgcgacc
aaaaggactatgatacacattattttattaattaaccgtttgttcggttgctcccccggc
ttacagataggaaatatcatggcagaaaatcaaaataatctgatctggatcgatctggaa
atgaccggtctcgatccagagcgggatcgcattatcgaaatcgctaccttggtcactgat
gcgaatcttaatattctggcagaaggacctgttctggcagtccatcaatctgctgaacag
cttgggctaatggatgagtggaatgttcgtacccatactggtagtggcttggttgagcgg
gtgaaagccagcccctttaatgaccgtgatgctgaattacaaactatcgaattcctaaaa
cagtgggtccccgcgggggtttcacccatttgcggtaacagtgtaggtcaggaccgccgt
ttcctgttccgctacatgccagagcttgaagcgtatttccattaccgctatgtagatgtc
agtacattgaaagagttagcgcgtcgctggaaacctgaaattctggctggttttaaaaag
caaaatacccatcaggcattggatgacattcgtgagtcagtcgccgagcttgcttactat
cgtgagcattttattcaatcttaa
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