Yersinia pestis Pestoides F (biovar Antiqua): YPDSF_0428
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Entry
YPDSF_0428 CDS
T00505
Name
(GenBank) DNA primase
KO
K02316
DNA primase [EC:
2.7.7.101
]
Organism
ypp
Yersinia pestis Pestoides F (biovar Antiqua)
Pathway
ypp03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
ypp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
YPDSF_0428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ypp03032
]
YPDSF_0428
Enzymes [BR:
ypp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.101 DNA primase DnaG
YPDSF_0428
DNA replication proteins [BR:
ypp03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
YPDSF_0428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNAG_N
zf-CHC2
DnaG_DnaB_bind
Toprim_2
Toprim
Toprim_4
DnaB_bind
Toprim_3
DUF3972
Motif
Other DBs
NCBI-ProteinID:
ABP38841
LinkDB
All DBs
Position
complement(483163..484911)
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AA seq
582 aa
AA seq
DB search
MAGRIPRVFINDLLARTDIIDLIDARVKLKKQGKNYHACCPFHHEKTPSFTVNGEKQFYH
CFGCGAHGNAVDFLMNYDRLEFVESIEELATMHGLEVPYEAGSGTTQIERHQRQSLYQLM
ESLSAFYQQSLKGQNAKQAREYLKHRGLSEEIIQHFAIGFAPPGWDNALKRFGRDGESRT
ALNDAGMLVTNDTGRTYDRFRERVMFPIRDKRGRVIAFGGRILGDGVPKYLNSPETEIFH
KGRQLYGLYEAQVNHPNPTRLLVVEGYMDVVALAQFGIDYAVASLGTATTAEHIQLLFRA
TDNVICCYDGDRAGRDAAWRALETALPYLNDGRQLRFMFLPDGEDPDTLVRKEGKDAFEQ
RMEAAQPLSTFLFETLMPQVDLSSPDGRAKLSTLALPLISQVPGEALRLYLRQQLGNKLG
LLDDSQLDKLMPKQIDNANTYQPPQLKRTTMRILIGLLVQNPQLATLIPSLQGLEQAKLA
GLPLFIELVETCLAQPGLTTGQLLELYRDNKFSQQLETLATWNHMIVEDMVEPTFVDTLA
SLYDSILEQRQETLIARDRTHGLNAEERKELWSLNLALARKK
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggctggacgaattccacgtgtatttatcaatgacttgctagctcgcactgacatcatc
gatcttatcgatgctagggtaaagctgaagaagcaaggcaaaaattaccatgcgtgctgt
ccgttccatcatgagaaaacaccctcattcactgttaacggcgaaaaacagttttatcac
tgttttggctgcggcgctcatggcaatgctgttgattttttgatgaattacgatcgactc
gagtttgtcgaaagtatcgaagaattagccaccatgcacgggctggaagtgccttacgag
gcaggcagcggcaccactcagatcgaacgacaccaacgacaaagtctttatcaattgatg
gaaagcctaagcgcattctatcagcagtcactcaaaggccagaatgccaaacaggctcgt
gaatatcttaaacatcgcggtttgagtgaagaaatcatccaacattttgctatcggtttt
gcgccccctggttgggacaatgccttaaaacgttttggtcgtgatggcgagagccgtaca
gcactgaacgatgccgggatgctggtaactaatgataccgggcggacttacgatcgtttt
cgtgagcgcgtcatgttccctattcgcgataaacgcgggcgggtcatcgcttttggcggg
cgaattctgggtgatggagtgccgaagtacctcaactccccagaaacagaaatttttcat
aaaggccgccagttatatggcttgtatgaagcacaagtcaatcatccaaacccaacccgc
ctactcgttgtggaagggtatatggatgtggtggcactcgcacaatttggtattgattat
gctgttgcctcattgggaacagcgacaaccgctgagcatattcagctgttattccgcgcc
accgataacgtaatttgttgttatgacggtgatcgcgctggtagagatgccgcctggcga
gcattagaaacggcactgccctatctaaatgacggacgtcagctacgctttatgtttttg
cccgatggcgaagaccctgacaccttggttcgtaaagaagggaaagacgcatttgaacaa
cggatggaggcggcacagccactctcaaccttcttgtttgaaacgttaatgccacaggta
gatttgagcagccctgatgggcgcgccaaactgagcacactggcattacctttaatcagc
caagtacctggtgaagcgctgcgcttgtacctacgtcagcaattagggaataagttaggt
ctgcttgatgacagccagctcgataagctgatgccaaaacagattgataatgcaaatacc
taccagccgccccagctaaaacgcacaaccatgcgtatacttatagggctattggtacaa
aacccacaattggctacacttattccctcattacaggggctcgaacaagccaaattggcg
ggtttaccgttatttattgagttggttgaaacctgtctggcccaaccggggctgacaacc
gggcagttgctggaactgtaccgtgataataaattcagccaacaacttgaaactcttgca
acatggaaccacatgattgtagaggatatggtcgaaccgacttttgtcgacacgctagcg
agcctgtatgactccattttggagcaacgtcaggaaacgctaatagcgcgggaccgtaca
catggattaaacgccgaagaacgtaaagagctttggtctttgaatctggcactagccaga
aaaaaatga
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