Yersinia pestis Pestoides F (biovar Antiqua): YPDSF_2905
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Entry
YPDSF_2905 CDS
T00505
Name
(GenBank) tRNA/rRNA methyltransferase
KO
K03214
RNA methyltransferase, TrmH family [EC:2.1.1.-]
Organism
ypp
Yersinia pestis Pestoides F (biovar Antiqua)
Brite
KEGG Orthology (KO) [BR:
ypp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ypp03009
]
YPDSF_2905
03016 Transfer RNA biogenesis [BR:
ypp03016
]
YPDSF_2905
Ribosome biogenesis [BR:
ypp03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
YPDSF_2905
Transfer RNA biogenesis [BR:
ypp03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
YPDSF_2905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
SpoU_sub_bind
Motif
Other DBs
NCBI-ProteinID:
ABP41267
LinkDB
All DBs
Position
complement(3292997..3294163)
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AA seq
388 aa
AA seq
DB search
MNDSFSGKNGKVKVMYVRSDESSDDRNSSNRDNRNNSSRDNSNRDNNSRGRSQRPAGNGR
PGDNARQGDNTRQGNAPRNNDSRRPDSGRNERDRPSRPARSEGSSPYDSPWKTVSRAPSE
EPEFDHGGISGKSHIDPAQLRRQRAEETRVYGENACKALFESRPDAIVRAWFVQSVTPRF
REALKWMAANRKAYHVVEEDELAKASGTEHHGGVCFLIKKRQGLDAETYLQQQTQAKDCV
LALEEVGNPHNLGGIMRTCAHFGINGVLLQDPAMLESGAAVRTAEGGAEHIKAINADDFL
SVLDTFRKAGYTIVTTSSHKGVSLSKAELPAKMVLVLGQESDGLTDSAWQQGDLSVSIGG
TGRVESLNVSVATGILLAEWWRQNSAQG
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaacgattcatttagtggcaaaaacggcaaagttaaagtgatgtacgtccgtagtgac
gaaagcagcgacgaccgtaacagcagtaaccgcgataaccgcaataacagtagtcgtgat
aacagtaatcgtgataataacagccgcggcagaagccagcgtccagcgggtaacggtcgc
ccgggtgataatgcacgtcagggcgataatacacgtcagggtaatgcaccacgcaataat
gactcacgtcgtcctgattctggccgtaatgaacgtgatcgtcctagccgtccggcacgt
tctgaaggcagtagcccttacgattcaccgtggaaaacggtatctcgtgccccttcggaa
gagccagagtttgatcatggtggtatcagcggtaaaagccatatcgatcctgcccagttg
cgccgtcagcgcgctgaagaaacacgcgtttatggtgagaatgcttgtaaggcgctgttt
gaaagccgccctgatgctatcgtccgggcttggtttgtgcaatctgtgaccccgcgtttt
cgtgaagcgctgaaatggatggcggctaaccgcaaagcttatcatgtggttgaagaggat
gagctggcgaaagcttcgggcactgaacaccatggcggggtatgtttcctgattaaaaaa
cgtcaggggctggatgcagaaacgtatctgcaacagcaaactcaggctaaagattgtgta
ctggcgctggaagaggtgggtaacccccataatctgggcggcattatgcgtacctgtgcg
catttcggtatcaacggcgtgttgctgcaagacccggcgatgctagaatctggcgcggca
gtccgcacggcggaaggcggagcagagcacatcaaggccatcaatgctgatgatttctta
tcggtattggataccttccgcaaggcgggttacaccatcgtgaccacctccagccataaa
ggtgtcagcttatcgaaagccgaactgccagctaaaatggtattggtattagggcaggag
agcgatggtttgacggacagtgcctggcagcagggggatctgagtgtctctatcggcggt
accgggcgggtcgaaagcctgaacgtttccgtggcaacgggtatcctgttggcggaatgg
tggcgtcagaatagcgctcaaggctag
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