Yersinia pseudotuberculosis EP2/+: BZ20_3177
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Entry
BZ20_3177 CDS
T03678
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ypr
Yersinia pseudotuberculosis EP2/+
Pathway
ypr03030
DNA replication
ypr03430
Mismatch repair
ypr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ypr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BZ20_3177 (dnaE)
03430 Mismatch repair
BZ20_3177 (dnaE)
03440 Homologous recombination
BZ20_3177 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ypr03032
]
BZ20_3177 (dnaE)
03400 DNA repair and recombination proteins [BR:
ypr03400
]
BZ20_3177 (dnaE)
Enzymes [BR:
ypr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BZ20_3177 (dnaE)
DNA replication proteins [BR:
ypr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BZ20_3177 (dnaE)
DNA repair and recombination proteins [BR:
ypr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BZ20_3177 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
MutS_II
Motif
Other DBs
NCBI-ProteinID:
AJJ08464
UniProt:
A0A3G5KN00
LinkDB
All DBs
Position
3631088..3634570
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMIDGLAKIGPLVKRAAALGMPALAITDFTNLCGLVKFYGSAHGA
GIKPIIGADFYVQSEILGDELAHLTVLARNNEGYQNLTLLISEAYQRGYGAAGPIIDRDW
LIKHKEGLILLSGGRMGDVGKFLLRGNQVQVDQCLAFYQEHFPDCYYLELIRTGRPDEEN
YLHAAVALATERGLPVVATNDVRFIDESDFDAHEIRVAIHDGFTLVDPKRPKNYSPQQFM
RDEEQMCELFADIPEALINSVEIAKRCNVTIRLGEYFLPQFPTGEMSTEDFLVEKAKQGL
EERLEFLFPDPEVRLQKRPEYDERLDIELKVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDIDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDLVIEHVAE
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPLDPGMTLEKAFAAEPQ
LAEIYEADEEVRALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDAEGNNPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINARRAKTGLAPIDIASIPLEDKKSFDML
QRSETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREA
ISYPDIEWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYSLGGADMLRRAMGKKNPAEM
AKQRSVFEDGAKNQGIDGELAIKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTDKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAILEARKEGGYFKELFDLCARVDTKKLNKRILEKLIMSGAFDRLGPHRAALMS
SLGDALKAADQHAKAEAIGQVDMFGVLADAPEQVEQSYANVPPWQEQVVLDGERETLGLY
LTGHPITQYLKEIERYAGGMRLKDMHPTDRGKMTTAVGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALEKYQHLLEKDRILIATGQVSFDDFSGGLKMTARELMDISEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRAGTIPVHLYYQREDARARLRFGATWRVTPTD
RLLIDLRTLVGNEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacctcgttttgtccacctgcgtgttcatagcgattattccatgatcgatgga
ttagctaagattggacctttggtgaaaagagctgctgcattaggtatgcctgctctggct
attaccgattttactaacctctgtggcctggtgaaattctacggcagcgcgcatggtgcg
gggattaaacccatcatcggtgctgacttctacgtacaaagtgaaatactgggtgatgaa
ttagctcacctcacggttttggctcgcaataatgaaggttatcaaaatctgactttattg
atctcagaagcctaccaacggggttatggcgctgcgggtcctatcattgatcgcgattgg
ctgatcaaacataaagaaggactcattctgctgtctggtggccgaatgggggatgtaggc
aaatttctgctacggggtaaccaggttcaggttgatcaatgtctcgccttttatcaggaa
cactttccagactgctattacctcgaacttattcgaaccgggcgtccagacgaagaaaac
tatcttcatgctgccgtggcattggccactgagcgtggtttacctgtcgttgcgaccaat
gatgtgcgttttattgatgaatcggattttgatgcccatgaaatccgtgtcgctatccat
gatggttttacattggtcgatcctaaacggccgaagaattacagccctcagcagtttatg
cgcgatgaagaacagatgtgtgagctgttcgctgatattccagaagcgttgatcaacagc
gttgagatagccaaacgctgtaatgtcactattcgccttggggaatatttcttaccgcag
ttccccacaggggagatgagtacagaagattttctggtagaaaaagccaaacaaggtttg
gaagaacgtttggaatttctgtttccggaccctgaggttaggctgcaaaaacggccagaa
tatgatgaacgtctggatatcgagctcaaagttatcaaccaaatgggcttccctggttac
ttcctgattgtaatggagtttatccagtggtcgaaagataacggcgtaccggtggggccg
gggcgtggctctggtgcaggctcattggtggcttatgccctgaaaattactgatattgac
ccactggaatttgatctactgttcgagcgcttccttaatccggaacgtgtatcgatgcct
gacttcgacgttgacttctgtatggagaaacgtgatctggtgatcgaacacgtggcggaa
atgtatggccgcgatgcggtttcccagataattaccttcggtaccatggcggctaaagcg
gtcatccgcgatgtcggccgtgtattaggccatccctatggctttgttgatcggatctca
aaattaatcccactcgatccggggatgacactggaaaaagcgtttgcagcggagccacag
ctagctgaaatttatgaagctgatgaagaggtcagggcgctaattgatatggcgcgtaag
ctggaaggagtaacgcgaaacgccgggaaacatgctggaggcgtggttattgcccccact
aagattaccgattttgccccactctattgtgatgcggaaggcaataacccagttacgcag
tttgataaaaatgatgtggaatatgctgggctggtgaagtttgacttcctcggtctacgt
acactaactatcattaactgggcgttggagatgattaacgcccggcgcgctaaaactgga
ttagcgccaattgatatcgcctctattccgctggaggataaaaaaagcttcgatatgctg
caacgttcggaaacgacagcagtattccagctggaatccagagggatgaaagatttgatc
aagcgcctgaagcccgactgcttcgaggacatgatcgccttggtggcgttatttcgtccc
ggtccgttacaatcagggatggttgataactttattgaccgtaaacacggccgagaagcg
atatcttacccagatattgagtggcaacatgaatccttgaaacctgtgcttgagccgacc
tacggcattatcttgtatcaggaacaggtcatgcaaattgcgcaggttctgtccggctac
tcactgggtggtgcggacatgttgcgtcgtgccatgggtaagaaaaaccctgctgagatg
gctaagcagcgttctgtatttgaagatggtgcgaaaaatcagggtattgatggtgagctg
gcgattaaaatctttgacctggttgagaaatttgcaggttacggttttaacaaatctcac
tcggcagcttatgcattagtctcctatcaaacgttgtggttaaaagcccattatccggct
gaatttatggctgcagtaatgaccgctgatatggataatacggacaaagtggtcggcttg
gtcgatgaatgctggcgtatggggctgaaaattctgccccctgacatcaacagcggtttg
taccatttccatgtaaacgatgatggcgaaattgtttatggtattggtgccattaaaggt
gtaggtgaggggccgatagaagccattctggaggcgcgtaaagaggggggctattttaaa
gagttatttgacctatgcgcccgtgtcgataccaaaaagcttaacaagcgtattttagaa
aaactgatcatgtccggtgcatttgaccgtttggggccacaccgtgcagcattgatgagt
tctctcggggatgcgcttaaagccgcagatcaacatgctaaagccgaagcaattggtcag
gtagatatgtttggtgtattagccgacgcgcctgagcaggttgagcaatcctatgccaat
gtgccgccatggcaggagcaggttgttttagatggtgaacgggaaacgctggggctgtat
ttaactggccatccgatcactcagtacctcaaggaaatcgaacgctatgccggtgggatg
cgtttgaaggatatgcatccgacggatcggggcaaaatgaccaccgcagtggggttggtg
atcgcggcaagggttatggtcacaaaacgtggtaatcgcattggtatttgtacgctagat
gaccgctctggtcgtctggaggtgatgttattcaccgatgcattggaaaaatatcagcat
ttattggaaaaagaccgtatcctgatagccaccggacaggtcagctttgatgactttagt
ggtgggcttaaaatgaccgcccgtgagttaatggacatcagtgaagctcgtgaaaaatat
gcccgtgggcttgctatctcgctgactgacaggcaaattgatgaccagcttttgaaccgt
ctccgtcagtcgttggaaccccatcgagcggggacgatcccagtacatctttattaccaa
cgggaagatgctcgcgcccggctgcggtttggagccacatggcgcgtgacgcccaccgat
cgcttattaatcgatttgcgaacgttggtaggtaatgagcaagtggaactggaatttgac
taa
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