Yersinia pestis D182038: YPD8_3068
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Entry
YPD8_3068 CDS
T01833
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ypx
Yersinia pestis D182038
Pathway
ypx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ypx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
YPD8_3068 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ypx03019
]
YPD8_3068 (pnp)
03016 Transfer RNA biogenesis [BR:
ypx03016
]
YPD8_3068 (pnp)
Enzymes [BR:
ypx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
YPD8_3068 (pnp)
Messenger RNA biogenesis [BR:
ypx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
YPD8_3068 (pnp)
Transfer RNA biogenesis [BR:
ypx03016
]
Prokaryotic type
tRNA degradation factors
YPD8_3068 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_2
KH_2
aRib
UPF0181
Spt6_S1
Motif
Other DBs
NCBI-ProteinID:
ACY63740
LinkDB
All DBs
Position
complement(3875322..3877439)
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AA seq
705 aa
AA seq
DB search
MLTPIIRKFQYGQHTVTIETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQSFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLTSRLIDRPIRPLFPDSFLNEVQVIATVVSV
NPQINPDIVALIGASAALSLSGIPFNGPIGAARVGFINDQYVLNPTTDELKESRLDLVVA
GTAGAVLMVESEADILSEEQMLGAVVFGHEQQQVVIENINALVAEAGKPKWDWQAEPVNE
ALHARVAELAEARLGDAYRITEKQERYTQVDAIKADVTEALLAQDDTLDAAEIQDILASV
EKNVVRSRVLRGEPRIDGREKDMIRGLDVRTGILPRTHGSALFTRGETQALVTATLGTAR
DAQNIDELMGERTDSFLLHYNFPPYCVGETGMVGSPKRREIGHGRLAKRGVLAVMPSASE
FPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNFVVLSD
ILGDEDHLGDMDFKVAGSRDGVTALQMDIKIEGITREIMQVALNQAKGARLHILGVMEQA
ISTPRGDISEFAPRIYTMKINPEKIKDVIGKGGSVIRALTDETGTTIEIEDDGTIKIAAT
DGDKAKHAIRRIEEITAEIEVGRIYAGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQDVPVKVMEVDRQGRIRLSIKEATTPDAEAPEAAAE
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
ttgctgactccgattattcgtaaattccagtatggtcaacataccgtaactatcgaaact
ggtatgatggctcgccaggccactgcagccgtaatggtaagcatggacgacactgcagta
ttcgtgactgttgttggtcaaaagaaagccaaaccaggccagagtttcttccctctgacg
gttaactatcaggagcgtacttacgctgctggccgtatcccaggtagcttcttccgtcgt
gaaggccgcccaagtgaaggcgaaacactgacttcacgtctgatcgaccgcccaattcgc
ccactgttcccagacagcttcctgaacgaagttcaagtgattgcaaccgtcgtttcggtt
aacccacaaattaacccagacatcgtggcactgattggtgcatctgcggcactgagcttg
tcaggcattccatttaacggcccaatcggtgctgctcgcgttggttttatcaacgaccag
tatgtgctgaacccaaccactgacgagctgaaagagagccgtttggatctggttgttgcc
ggtactgcgggtgcagtgctgatggttgaatcagaagccgatattctgtccgaagagcaa
atgttgggcgcggtcgtcttcggccacgaacaacagcaagttgtgattgaaaatattaac
gctttggttgctgaagctggcaaacctaagtgggattggcaggcagagcctgtcaacgaa
gcactgcatgcgcgtgttgctgaactggccgaagcgcgtctgggcgatgcataccgtatc
actgaaaaacaagaacgttatacgcaagttgatgctatcaaagctgacgtgaccgaagcg
ctattagcgcaggacgacacattagatgccgctgaaattcaggatatcctggccagcgtt
gagaaaaatgttgtgcgtagccgtgtgctgcgtggtgagccacgtatcgatggtcgcgaa
aaagacatgatccgtggtttggatgtacgtactggcatcttgccacgtactcatggttct
gccttgttcacccgcggtgaaactcaggcgttggttaccgctacgctgggtacggcacgt
gacgcacaaaacattgatgagttgatgggtgagcgcacagattcattcctgttacactat
aatttccctccgtattgtgtaggcgaaacagggatggttggctcacctaagcgtcgtgag
attggccatggccgccttgcgaaacgtggtgttctggctgtgatgccaagtgcgagcgag
ttcccttacactattcgtgtggtttctgaaatcaccgagtctaatggttcttcctcaatg
gcttctgtttgtggtgcttctctggctctgatggatgcgggcgtgccaattaaagccgct
gttgctggtattgcaatgggcctggtaaaagagggtgataactttgtcgttctgtctgac
attctgggtgacgaagatcacttgggcgacatggactttaaagtagccggtagccgtgac
ggtgtgaccgcactgcaaatggacattaaaattgaaggtattacccgcgaaattatgcag
gtagctctgaatcaggctaagggtgcacgtttgcacattctgggcgtgatggaacaggct
atcagcacaccacgtggcgatatctctgagtttgctccacgtatctacaccatgaagatc
aaccctgagaaaatcaaggatgtgatcggtaaaggtggttcggtgatccgtgcgctgact
gatgaaactggcaccacgattgaaatcgaagatgatggtaccattaagattgcagcaact
gatggcgataaagcaaaacacgctatccgtcgtatcgaagagattactgctgaaatcgaa
gtgggccgtatttacgcaggtaaagtcacccgtatcgttgatttcggtgcatttgttgct
atcggtggcggtaaagaaggtctggtacatatttctcaaatcgctgataagcgtgtagag
aaagtgacagactacctgcagatgggtcaagatgtgccagttaaagtaatggaagttgat
cgtcagggccgtatccgcctgagcatcaaagaagccactactcctgacgcagaagcacca
gaagcagcagcagagtaa
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