Yersinia pseudotuberculosis YPIII (serotype O 3): YPK_3547
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Entry
YPK_3547 CDS
T00665
Name
(GenBank) SNF2-related protein
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
ypy
Yersinia pseudotuberculosis YPIII (serotype O:3)
Brite
KEGG Orthology (KO) [BR:
ypy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ypy03021
]
YPK_3547
Transcription machinery [BR:
ypy03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
YPK_3547
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_34
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
ACA69814
UniProt:
B1JKV7
LinkDB
All DBs
Position
3902173..3905079
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AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVAIDVRMITLLFPATGENRLYARNDSPITRVMFNPSDT
ITHHEGWQLKVEEVTQENGLITYIGTRLDTEETGVAMREVLLDSKLTFSKPQDRLFAGQI
DRMDRFALRFRARKYQSEQFRLPWSGLRGIRASLIPHQLHIAYEVGQRHAPRVLLADEVG
LGKTIEAGMIIHQQLLAGRAERVLIVVPESLQHQWLVEMLRRFNLRFSLFDDSRYSEALL
DSSNPFDTEQMVICSLDFVRRNKQRLEQLADASWDLLVVDEAHHLAWSEEAPSREYQVIE
QLAEHIPGVLLLTATPEQLGQQSHFARLRLLDPDRFHDYEEFVNEQQKYRPIADAVTLLL
GGERLTDDKLNLLGELIDEQDIEPLLKAANSQSEDSEAARQELVTMLMDRHGTSRVLFRN
TRNGVKGFPHRVLHQIKLPLPTQYQTAIKVSGIMGAKKTLDARAKDMLYPEQIYQEFEGE
NATWWNFDPRVEWLLNYLVANRGEKVLVICAQAATALQLEQVLREREAIRAAVFHEGLSL
IERDRAAAYFASEEDGAQVLLCSEIGSEGRNFQFACQLVMFDLPFNPDLLEQRIGRLDRI
GQNREIQIMVPYLEDTAQAILVRWYHEGLDAFEHTCPTGRTIYDSSYQELISYLATPSEQ
EGLDEFIHTCRQQHEGLKLQLEQGRDRLLEMHSNGGEHGQELAQSIAEQDNDINLVSFAL
NLFDIVGINQEDRSDNLIVLTPSDHMLVPDFPGLPPDGCTVTFDREQALSREDAQFVSWE
HPIIRNGLDLILSGDTGSCAVSLLKNKALPVGTLLAELVYVVEAQAPKHLQLTRFLPPTP
VRMLMDRNGTNLAAQVEFESFNRQLNAVNRHTSSKLVNAVQQEVHTMLQQAEALVEAQAQ
ALIETAKREADDKLSTELARLEALKAVNPNIRDDEIEALEHNRKMVLENLNQAGWRLDAI
RLVVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcaacgctggatcagcgacacagaaagcgaacttggattgggt
actgtcgttgccattgacgtgcgcatgatcaccttactgttccctgcaaccggtgaaaac
cgcctttacgccagaaatgactcgccaatcacccgggtcatgttcaatccgagcgatacc
atcactcaccacgaaggctggcagctgaaagtggaagaagtgactcaagaaaatgggctg
attacctatatcggtacccgtttggatactgaggaaaccggcgtcgccatgcgtgaagtt
ttgctcgatagcaaactgacttttagtaaaccacaggatcgcttattcgccggtcagatc
gatcgcatggatcgctttgccctgcgttttcgcgcccgtaaatatcaaagcgagcagttc
cggttgccgtggagcggcctgcgtggtatccgtgccagcctgatcccacaccagttacat
atcgcttatgaagtgggtcagcgccacgcgccacgggtcttactggccgatgaagtgggg
ttgggtaaaaccatcgaagccgggatgattatccaccagcaactgctggctggccgtgct
gaacgggtgctgatcgtggtaccggagagcctacaacatcagtggctagtagagatgtta
cgccgcttcaacctgcgcttctcactgtttgatgacagccgttattccgaagccttgttg
gacagtagcaatccgtttgataccgaacagatggtgatttgttcgctggattttgttcgt
cggaataagcagcggttagaacaactggccgatgcttcctgggatctgctggtggtggat
gaagcgcaccatctggcctggagtgaagaggctccaagccgcgaatatcaagtgattgaa
cagttggccgagcatatccccggcgtgctgttattgacagcaacaccagagcaattgggc
caacagagtcactttgcccgcctgcgtttgctggatccagatcgcttccatgattacgaa
gagttcgtcaatgaacaacagaaataccggcctatcgccgatgccgtcaccttgctgtta
gggggcgagcgtttaactgatgataagctgaatctgttaggtgaactgattgatgaacaa
gatattgagccactactgaaagcggccaatagccaaagtgaagacagcgaagcggcgcgt
caagaattagttaccatgctgatggataggcacggtactagccgggtgctgttccgtaat
acccgtaatggggtaaaaggcttcccgcaccgcgtcttacaccaaattaagctgccattg
ccaacacagtaccaaactgcaattaaggtctctggcatcatgggggcgaagaaaaccctc
gacgctcgtgcaaaagatatgctttatcccgagcaaatctatcaggagtttgaaggcgaa
aacgccacctggtggaactttgacccacgggttgaatggctactgaactatttggttgcc
aaccggggtgagaaggtgttggtgatctgcgcacaagccgctacagctttgcagcttgaa
caagtgttacgtgagcgtgaagctattcgggccgccgtcttccatgaaggtttatcgctg
attgaacgtgaccgtgccgccgcctattttgcctcagaagaagatggtgctcaggtctta
ctgtgttccgaaattggttcagaggggcgtaacttccaatttgcctgccaactggtcatg
ttcgatttgccgttcaaccccgatctcctggagcaacgtattggccgtttggatcgtatc
ggccagaaccgtgaaatccagattatggtgccttatttggaagacaccgcgcaggcaata
ctggttcgttggtaccacgaagggttggatgcgttcgaacacacctgcccaacaggccgt
accatttatgacagcagctatcaggaactgattagctatttggccacgccaagtgagcag
gaagggttggatgagtttatccacacctgccgtcagcagcacgaagggttaaaacttcag
ttggaacagggccgtgaccgcttactggagatgcactctaacggtggcgaacatgggcag
gagctggcacagagcattgccgaacaagataatgacatcaatttagtcagttttgcactc
aacctgttcgatattgtcgggatcaaccaggaagatcgtagcgataacctgatcgtgctg
accccgtccgatcacatgctggtgcccgatttccccggtttgccaccagatggctgcacc
gtcacctttgatcgtgaacaggcactctcgcgggaagatgcccagtttgtcagttgggaa
caccccatcatccgcaatgggttggatttgatcctgtctggcgataccggcagttgcgcg
gtgtctttattgaaaaataaagccttacccgtcggtaccctgctggctgagttagtttac
gtggtcgaggcacaagcaccgaaacacttgcaactgacccgtttcttgccaccaacaccc
gtgcgtatgctcatggatcgcaacggcactaacctggcggcacaggttgaatttgaaagt
ttcaatcgccaactgaatgcggtaaaccgccatacctccagcaagctggtcaatgcggtt
cagcaagaagttcacaccatgttgcaacaagccgaagcactggtagaagcgcaagcgcag
gctctgattgaaacggcaaaacgcgaggccgatgataagttgagtactgaactggcgcgt
ctggaagcgttgaaagcggttaacccgaatattcgtgatgacgaaatagaggcgcttgag
cataaccgtaagatggtgctggaaaacctgaatcaagcaggctggcgtttagatgctatc
cggctggtggtggtaacacatcagtag
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