Yersinia ruckeri Big Creek 74 (serotype O2): UGYR_14310
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Entry
UGYR_14310 CDS
T03887
Name
(GenBank) ATP-dependent dsDNA exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
yrb
Yersinia ruckeri Big Creek 74 (serotype O2)
Brite
KEGG Orthology (KO) [BR:
yrb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yrb03400
]
UGYR_14310
DNA repair and recombination proteins [BR:
yrb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
UGYR_14310
Archaeal homologous recombinant proteins
UGYR_14310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
ABC_tran
cobW
nSTAND3
TsaE
AAA_21
GTP_EFTU
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AKA39441
UniProt:
A0A085U561
LinkDB
All DBs
Position
complement(3173085..3176768)
Genome browser
AA seq
1227 aa
AA seq
DB search
MKILSLRLKNINSLQGEWKIDFTAEPFASNGLFAITGSTGAGKTTLLDAICLALYHQTPR
IKVSPSQNELMTRHTAESLAEVEFEVKGVSYRAFWSQRRAKNSPEGNLQAPKVELALCQD
GTILADKVGDKLSQIAAITGLDFGRFTKSMMLSQGQFAAFLNADANDRAELLEELTGTEI
YGRLSEQVFEQHKQAKAELDTLYLRANGIELLNEDQRQTLQSELDALHQQEQQFGAELLA
LQHQIAWITSLQQQQQHIQQCNQQRQQVELEYQQAEPDLLRLARSEPAEKLRPLQIARNQ
CLQDLQQTQQRIAEITQQQQQYQFRLTPLTLAFEQATKARQQHTAVQDEQEKLIEQQIAP
LDNQIDNQKKLLAQLDLQLQQLQTKTQQDTQQFEQDEQRLQTIHQRLRQLTDYAISHTHH
QQWEKNLPLWREQFHQLHLQRQLLADGTQQLQQKITLIDTQQQQITVLNQQEKQQQTTLV
EAEKLAGNIQQQLLLLEQQSPQAPLRQRLGELNEQRRSRLELAKLSPLAQQIQARHDQQR
QQFSTQQQQLDVLKQQLEEKRQQYQQQKQHLTDLEALYEREKQIVTLEAERTRLQAGQAC
PLCGALEHPAIAEYQALKPSETALRVAALRKQVEALYTAGSELRAQSESLRQNQARLDQE
LQQSSQLLADYQQTWQALTQPLALTFQLNEPTLLTTWLEQQEQQEQDCQRKLAEYEHLQQ
QSQQAKNTLALAEQSQQKNRQDITLLQQRLSDTQQAHKELQQSYQRQQDEFKARQQAFID
ALAKLGLQLPAPEQQQNWLNQRESEWQRWQQHQQEQQDLVLRQKMLETRLESQRSHLQEA
NEQLAELTRQHQQIGDDLKQQIKHRLSLFGDRMVAEVRQTLRQQQQQLELAQQKAADELQ
QWQSQLSRLSGELATLEQQLQQYQLRASASQTALQQALANSEFSDEQTLTAALLSDDERQ
HLQQWQQQLSQRRQQADIRQQQASEALARHIQACPSGIDQHTDLADLQQRSDQLSTQRKT
STLRQGELRNQLESDAIRRVTQSALFDKIENSQQQYDDWSYLNHLIGSKEGDKFRKFAQG
LTLDHLVYLANNQLTRLHGRYLLQRKTNDALELLVVDTWQADAIRDTRTLSGGESFLVSL
SLALALSDLVSHKTSIDSLFLDEGFGTLDAETLDTALDALDSLNATGKTIGVISHVEAMK
ERIPVQIKVKKINGLGISRLDSIFAVN
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattttaagtttacgcctaaaaaacattaactcgctacaaggcgaatggaagatt
gattttaccgccgagcccttcgccagcaatggtctgtttgccattactggctcgactggc
gcaggaaaaacaacgctgctggatgctatctgtttggcgttatatcaccagactccgcgg
ataaaagtttcacccagccagaatgaattgatgacccgtcacaccgcagaatcactggct
gaagtcgaatttgaagtaaagggtgttagctatcgcgcattctggagccagcggcgagcc
aaaaactcgcctgagggcaacttgcaggcacctaaagtcgaactggccttgtgccaggac
ggcactattctggctgataaagtgggagacaaactctcgcagatagccgctatcaccgga
ttggattttggtcgatttaccaaatcgatgatgctatcccaaggtcagttcgccgccttc
ctgaacgctgatgccaacgatcgcgccgagttattggaagagttaaccggaactgaaata
tacgggcggctatcagaacaggtttttgagcagcacaaacaggctaaagccgaattggat
acactgtatcttcgcgccaacggcatcgaattgctcaatgaagatcagcgacaaacatta
cagtcagaactcgacgcactgcaccaacaagaacagcagttcggcgctgaactactcgct
ttacaacatcagatcgcctggatcacgtccttgcagcaacaacagcaacatatacagcaa
tgtaaccagcaacgacagcaagttgaactggaatatcagcaagcagaacctgacctgcta
cggctagcgcgcagtgaacccgctgaaaaactgcgccctttgcaaatcgcgcggaatcag
tgcttgcaagacctgcaacaaacgcaacaacgcatagcagaaataacgcaacaacagcag
caataccaattccgacttacgccgctgacgctggcttttgaacaagcgaccaaggctcgc
caacaacatactgcagtgcaagacgaacaagaaaaactcatagaacaacagattgctcct
ctggataatcagatagataaccagaaaaaactgttggctcaactggatctacagttgcag
caattgcagaccaaaacacagcaagatacccagcagttcgagcaagacgaacagcggtta
caaacaatacatcagcggttacggcagttgactgactatgccatcagtcacactcatcat
cagcaatgggaaaagaacctgccgctgtggcgggagcaattccaccaactgcatctgcaa
aggcaattactcgccgatggcacgcaacagttgcagcaaaaaatcacactaattgacact
caacaacagcaaatcaccgtacttaaccagcaagaaaaacagcaacaaacaaccttggtc
gaagcggaaaaactggcaggcaatattcaacaacaactattactacttgagcaacagtct
ccacaagccccattgcgccaacgacttggcgagctgaatgaacagcgaagaagtcgacta
gaacttgccaaattatcgccgctggctcaacaaatacaggctaggcatgatcaacagcga
caacagttctctactcaacaacagcaacttgatgttcttaaacagcagcttgaagaaaaa
cggcagcagtaccaacagcagaaacagcatcttacggatctagaagcattgtacgagcgt
gagaagcagatcgtgacgctggaagccgaaagaacccgattacaggcaggccaagcctgc
ccactgtgtggcgcactggaacaccccgcgattgcggaatatcaggcactcaagccgtcc
gaaacagcgctacgcgttgctgccctgcgtaagcaagttgaagctctgtacactgctggt
agcgagttacgcgcccagtcagaaagcttgcggcaaaatcaggcgcgtctggatcaggaa
ctacagcaaagtagtcagttacttgctgattatcagcagacctggcaagcactgacacag
ccgctagcgctaacattccagctcaatgagccgaccttgctgactacctggctggaacaa
caagaacaacaagagcaggattgtcagcggaaactggcagagtatgagcacctgcagcaa
cagagccaacaggctaaaaatacattagccctggcagagcaaagccaacagaagaaccga
caggacatcaccctactgcaacagcgactatcggatactcagcaagcccacaaagagttg
caacagtcctatcaacgccagcaggatgaattcaaagcacgacaacaggctttcattgat
gcattagccaaactgggactccagttaccggctccagagcagcaacaaaattggttgaat
caacgggaaagtgaatggcagcgttggcaacagcaccaacaggaacaacaggatttggtt
ctacgacaaaaaatgctggagacccgccttgaaagtcaacgtagccatttacaggaagct
aacgagcagctagccgaactgactcgacaacatcagcagattggcgatgacttaaagcaa
cagattaaacaccgcctgtctctatttggtgaccgaatggttgccgaagtgcgccagact
ttgcgtcaacaacaacagcaactggaactggcgcagcagaaggccgctgatgagttacaa
caatggcaatcgcagctaagccgtctatccggtgaactggcgacgctggagcaacagtta
cagcaatatcagttgcgggcatctgcctctcaaacagcattgcaacaagcattggcaaac
agtgaatttagtgacgaacagacactgacagcggcattattaagtgacgatgaaagacag
cacttacagcagtggcaacaacaattgagccaacgtcggcaacaagcagatatccgtcaa
caacaagcgagtgaagcgctggcacgacatatacaggcttgcccatcggggattgatcag
cataccgatttagccgatctgcaacaacgatcagatcagctatcgacccaaagaaagacc
agtacgctacgacagggagaattgcgtaatcaattagagagcgacgccattcgtcgggta
acccagtcagcattgtttgataaaatagaaaatagtcagcaacaatacgatgattggagt
tatctcaatcacttaatcggttcaaaggaaggcgataaattccgcaaatttgcacaaggt
ctaacgctcgatcacctggtttatctggccaataaccagttaacacggctacacggacgc
tatctactgcaacgcaagaccaatgatgcactggaactcttggtggttgatacctggcag
gctgatgccattcgggatacccgaacgctttcaggaggagaaagtttcctggtcagtcta
tcgctggcactagcactgtcggatctggttagtcataaaaccagtattgactcattgttc
cttgatgaaggttttgggacgcttgatgcggaaacactggatacggctctggatgcgctg
gacagtctgaacgctaccgggaaaactattggtgtgatcagtcatgtggaggcaatgaaa
gaacgaataccagtacaaattaaagtgaagaaaattaacggattgggcattagccggctg
gacagtatttttgctgtaaattaa
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