Yersinia ruckeri Big Creek 74 (serotype O2): UGYR_14545
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Entry
UGYR_14545 CDS
T03887
Name
(GenBank) transcriptional regulator HU subunit alpha
KO
K03530
DNA-binding protein HU-beta
Organism
yrb
Yersinia ruckeri Big Creek 74 (serotype O2)
Brite
KEGG Orthology (KO) [BR:
yrb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yrb03032
]
UGYR_14545
03036 Chromosome and associated proteins [BR:
yrb03036
]
UGYR_14545
03400 DNA repair and recombination proteins [BR:
yrb03400
]
UGYR_14545
DNA replication proteins [BR:
yrb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
UGYR_14545
Chromosome and associated proteins [BR:
yrb03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
UGYR_14545
DNA repair and recombination proteins [BR:
yrb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
UGYR_14545
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AKA39483
UniProt:
A0A085U5A9
LinkDB
All DBs
Position
3230848..3231120
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AA seq
90 aa
AA seq
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MNKSQLIDKIAAGADISKAAAGRALDAIIASVTESLKAGDDVALVGFGTFAVRERSARTG
RNPQTGKEISIPAAKVPGFRAGKGLKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataagtcacaactgatcgacaaaattgccgcaggtgctgatatttctaaagcggcc
gctgggcgcgcgttagatgcaattattgcttctgttactgaatccttgaaagcaggggat
gatgtagctctggttggtttcggtacttttgcagtacgtgagcgctctgcccgtactggc
cgtaaccctcagaccggtaaagaaatcagtattccagctgctaaagttccaggtttccgt
gcaggtaaaggtctgaaagacgcggtcaactaa
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