Yokenella regensburgei: HEC60_13870
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Entry
HEC60_13870 CDS
T06519
Name
(GenBank) fimbrial biogenesis outer membrane usher protein
KO
K07347
outer membrane usher protein
Organism
yre
Yokenella regensburgei
Pathway
yre02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
yre00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HEC60_13870
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yre02000
]
HEC60_13870
02044 Secretion system [BR:
yre02044
]
HEC60_13870
02035 Bacterial motility proteins [BR:
yre02035
]
HEC60_13870
Transporters [BR:
yre02000
]
Other transporters
Pores ion channels [TC:
1
]
HEC60_13870
Secretion system [BR:
yre02044
]
Chaperone-usher system
Type 1 pilus assembly protein
HEC60_13870
Bacterial motility proteins [BR:
yre02035
]
Pilus system
Fimbrial proteins
HEC60_13870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usher
PapC_N
PapC_C
Motif
Other DBs
NCBI-ProteinID:
QIU90316
UniProt:
A0A6H0KD52
LinkDB
All DBs
Position
2866980..2869583
Genome browser
AA seq
867 aa
AA seq
DB search
MARDKKMDLSPRRLAYHIRWTLCVSAMPLLVAPLSYAEEQFNTSFIHGEDNVELVKDLAN
GDDILPGRYPFDIYVNKKRVDHREIEFKKLQPNIPGTFCLSAEDYREYGIMVAETAGSGA
CYDIVKAIPGSSMSWNAALQELDISVPQTHMEPRPQGAISPRVYEDGINAAYVNYSFSGD
HTRYKDSENTRQGEYYFLSLNNGVNLGSWRFRNNSTLTKQPGQKEDWTPVSTWAETDIVP
WRSRVQVGQSNTSNNVFDSFQFRGMQLSSIPEMLPDSLRGYAPVVRGVANTNARVEVRQN
GYTVYSTNVPPGPFALNDIYPSNLSGDLAVTVIEADGSRHSFSIPYSSVPNMLREGMWEY
QITAGKYHDGSTSYQPKFVQATFSHGTSFDLTPYGGVLMAEHYRSGVLGVGTNMGEWGAA
SVDAAWSDTDLASGDNKRGASFRFLYSKSLNSLGTEFQLAGYRYSTSGYYDFSDAINERA
SWDNGIYHTQYYDQDNNPNGVPDWATNQRKYYDTLRYNNKRQRVQLSVNQHIAGASLYAV
LSRQNYWGTSAYDRTVQTGVSTTWKRVNYGVFYQNSRSNYGYSDNSVNFNVSIPFSVFDT
NRDMTVSFNANHSKQSGNGYSTGLSGTLLDDNRMNYYLQTGHTKNGGNTSVANVGYQGSY
GNVEVGHSYNSNYQQTSLNVSGGVVMHSGGVTLSQPLQNTFVLVEAKGAQGVRLENQPGA
AIDHFGYAVQTSAMPYRHNRVALRTSDIGNGLDIPLASKDIVPTNRAIGKVVFETHLGQS
LLIHSKLSTGETPMIGATIFNSQGNSIGVVGTQGKAYVSGVESGEKLNMKWGDDAADSCM
MTVPQLPPIDTDKPGGYQEVTLTCSTK
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcgataaaaaaatggacctgtcaccacggcgtctggcttaccacattcgctgg
actctgtgcgtatcagcaatgccgctgttagtcgctccactgtcttatgctgaagagcag
ttcaatacctcattcattcacggtgaagataacgtcgagctggttaaagacctggctaat
ggcgatgacattctgccgggacgctatccgttcgacatctacgtgaacaaaaaacgtgtc
gatcaccgtgaaatcgaatttaaaaagttacagccgaatatcccagggactttctgcttg
tctgccgaggattaccgtgaatacgggatcatggtcgcggagaccgccggcagcggcgcc
tgctatgacatcgtaaaagcgattccgggcagctcgatgagctggaacgccgcattgcag
gagctggacatttcggttccgcagacgcatatggaaccgcgtccgcagggagctatctcc
cctcgcgtctacgaagacggtatcaacgccgcctatgtgaattactccttcagcggcgac
catacccgctacaaggacagcgaaaatacccgccagggcgaatactacttcctgtcgctg
aacaacggcgtcaacctcggctcgtggcgttttcgtaacaactccacgctcaccaaacag
ccggggcaaaaagaggactggacccccgtctctacctgggcggaaaccgacatcgtgcca
tggcgcagccgtgtgcaggtgggccagagcaataccagcaacaacgtttttgatagcttc
cagttccgcgggatgcagctttccagcattccggagatgctgccagacagcctgcgcgga
tatgcacccgtcgtgcgtggtgtcgccaacaccaacgcccgcgtcgaagtgcgtcagaac
ggttataccgtgtacagcaccaacgtgccgccgggacctttcgcgcttaacgatatctat
ccaagcaacctgagcggcgatcttgcggtaaccgtaattgaagccgatggctcgcgccac
agctttagcatcccctactcttctgtacccaatatgctgcgcgaagggatgtgggaatac
cagattaccgccggtaaatatcacgatggttcaaccagctaccagccgaaatttgtgcag
gcgaccttctcgcacgggacaagctttgacctgacgccatacggcggcgtgctgatggcg
gaacattaccgctccggcgtgctgggcgtgggtaccaacatgggcgaatggggtgcagcc
tccgtggatgccgcctggtctgacacggacctcgcctccggcgacaataagcgtggcgcc
agcttccgcttcctgtattccaaatctctgaacagcctggggactgaattccagctcgcc
gggtatcgttactccacttctggatactatgacttctcagacgccattaatgagcgcgcc
agctgggataacggtatttatcacacccagtattacgaccaggacaacaacccgaacggg
gtgccggactgggcgaccaatcaacgtaagtactacgatacgctgcgctataacaacaaa
cgtcagcgtgtgcagctatcggtaaaccagcatattgccggtgcctcgctgtatgccgta
ttgtcgcgccagaactactgggggacttccgcctacgaccgcacggtgcaaaccggtgtc
agcaccacatggaagcgcgtcaactatggggtgttctatcagaacagccgcagtaactac
ggttacagcgacaacagcgtcaacttcaacgtttcgattccgttcagcgtattcgatacc
aaccgcgacatgaccgtcagctttaacgccaaccacagcaagcagagtggcaacggctac
agcactggcctgagcggtacgctgcttgatgacaaccgcatgaactactacctgcagacc
ggccataccaaaaatggcgggaacaccagcgtagctaacgtcggttatcaggggagctat
ggcaacgtcgaagtgggccacagctataactccaactaccagcagacttcactgaacgtg
tcgggcggcgtggtgatgcactccggtggcgtcacgctgtcgcagccgttacagaatacc
tttgtgctggttgaagccaaaggcgcgcagggcgtgcgcctggaaaaccagcccggggct
gcgatagaccacttcggctacgcggtacaaacctctgccatgccataccgtcacaaccgc
gtggcgctgcgtacctccgatattggcaacgggctggatattccgctggcgtcgaaagat
atcgttccgaccaaccgcgctatcggcaaagtggtctttgaaacgcatctcggtcagagc
ctgcttatccacagcaaactcagcaccggtgaaacgccgatgattggcgccaccattttc
aacagccagggcaacagcattggcgtggtcggtacccagggtaaagcctacgtttccggc
gttgagagcggtgaaaaactgaatatgaaatggggcgatgacgctgctgactcctgcatg
atgaccgtgccgcagctgccgccgattgatactgataaaccgggtggttatcaggaagta
actctgacctgtagcacgaaataa
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