Yersinia rohdei: CH64_3162
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Entry
CH64_3162 CDS
T03610
Symbol
lsrR
Name
(GenBank) transcriptional regulator lsrR
KO
K11531
lsr operon transcriptional repressor
Organism
yro
Yersinia rohdei
Pathway
yro02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
yro00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CH64_3162 (lsrR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yro03000
]
CH64_3162 (lsrR)
Transcription factors [BR:
yro03000
]
Prokaryotic type
Other transcription factors
Others
CH64_3162 (lsrR)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sugar-bind
Crp
HTH_Crp_2
Sigma70_r4
MarR_2
HTH_37
UPF0175
Motif
Other DBs
NCBI-ProteinID:
AJJ11163
UniProt:
A0A0U1HWY9
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All DBs
Position
3530110..3531105
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AA seq
331 aa
AA seq
DB search
MMKEKPVIKEKPMSSNDEYKYPGNSMSEEELLARIAWFYYHDGLTQGDIGELLGLTRLKV
SRLLEKGRQSGVIRVQINSRYEGCLELENQLQQHFDLKHIRILPSLAELSISSRLGIGAA
HLLMALIQPQQLLAVGFGETTMCALQHLSGFIASQQIRLVTLSGGVGSYMTGIGQLDAAC
QVSIIPAPLRASSAKVAETFRQENSVRDVMLAACAADVAVVGIGSVNQQKEATILRSGYI
SEGEQLMFSRKGAVGDILGYFMQADGALAADMQIHQELIGISLADLTNIPTVIGVAGGVE
KAEAIVAALQGKYVNALVTDELTARSIIKLI
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaagaaaagccagtaataaaagaaaaacccatgtcgtccaatgatgaatacaaa
tatccgggtaatagcatgagtgaagaggaactgctcgctcgcattgcgtggttttattat
cacgatggcttaacacaaggggatattggtgagctgctggggctgaccagactgaaagtg
tccagattactggagaaaggccgtcagtctggggtaatccgggtacagattaattcgcgt
tatgaaggctgtctggaactggaaaaccaactgcaacagcattttgacctgaaacatatc
cgcattctgccttctttggctgaacttagcatcagtagccggttgggaattggtgccgca
cacttattgatggcattgatacaaccccagcaattgctggcggtgggatttggcgaaacc
accatgtgcgcgctacagcatttgagcggttttatcgcctctcaacagattcgtttggtg
acactttctggtggggtcggctcttatatgaccgggattgggcagttagatgcggcctgc
caggtcagtattattccagcacctttacgggcttccagtgccaaagtggctgaaaccttc
cgccaggaaaacagtgttcgtgatgtgatgctggcagcctgtgccgctgatgtggcggtg
gtgggtattggctcggtgaatcagcaaaaagaagccactattttgcgctccggttatatc
agcgaaggtgaacagctgatgttcagccgcaaaggcgcggtcggcgatattctcggctac
tttatgcaagccgatggtgcattggcggcagatatgcaaattcaccaagaattgattggc
atttctctggctgatctcaccaatatcccgacggttattggtgtggcggggggggtggag
aaagcagaagcgattgtggcggccttgcaaggcaagtatgtgaatgcattagtcactgac
gaattgacagcacggtctattattaaattgatttga
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