KEGG   Yersinia ruckeri YRB: BD65_2415
Entry
BD65_2415         CDS       T03611                                 
Symbol
hsdR
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
yru  Yersinia ruckeri YRB
Brite
KEGG Orthology (KO) [BR:yru00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:yru02048]
    BD65_2415 (hsdR)
Enzymes [BR:yru01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     BD65_2415 (hsdR)
Prokaryotic defense system [BR:yru02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   BD65_2415 (hsdR)
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N ResIII DEAD
Other DBs
NCBI-ProteinID: AJI94726
LinkDB
Position
complement(2636722..2639817)
AA seq 1031 aa
MSTIGQRERATQQRLIQFFVKDLGYRYLGRSAGYAGDSNIDMDILSAWLKRRGVSDTLIT
RVLRQLDSAAALGEGKKLYYANKEVYRLLRYGVKEKEGAGEQNQTVWLIDWANPEANDFA
IADEVTVKGEYSKRPDLVLYVNGIALGVIELKRSSVHVSEGIRQNLDNQKKTFIRNFFTT
MQLVMAGNDTQGLRYGTIETPEKYYLEWKEEHTDAYTHKLDFHLSRLCNKSRLLDIVHNY
IAFDVGVKKLCRHNQFFGVEAAKQHIARREGGIIWHTQGSGKSLTMVWLAKWIRENVPNS
RVLIVTDRTELDEQIESVFMGVDEEIYRTSSGNDLIATLNHPNPWLICSLVHKFGRRSEA
EDAAATDDFITELQQSLTKTFRAKGDLFVFVDECHRTQSGKLHNAMTAILPEALFIGFTG
TPLMKKDKKKSVEVFGPYIHTYKFDEAVADGVVLDLRYEARDIDQYLTSEKKVDDWFEAK
TRGLSNLAKTQLKQKWGSMQKLLSSKSRLEQIVNDILLDMDTRPRLMDGRGNAMLVCSSV
YQACKVYEMFSQTDLAGKVAIVTSFRPDAASIKGEETGAGLTEKLYKFSTYRKMLADYFE
QSEEKIAGRIAEFERDVKQRFINEPGQMRLLIVVDKLLTGFDAPSATYLYIDKTMTDHTL
FQAICRVNRLDGEDKEYGYIIDYKDLFRSLDKAITDYTTGAFDDYDRDDVDGLLKNRLEQ
AKLDLDSALEVVRSLCEPVKAPRELQDYQHYFCGQSGENQTILGEKEALRLSFYQNVARL
LRVYASLANEMQEAGYTDEEVESIRAEVAKFERLRYDIKLTSGDLLDMKRFEPAMRHLLD
MYVRADGSEVLMDFEELSLIELIVEKGAAATAALPDEIRNNQDAMAETIENNVRKTIVDE
NPVNPKYYGRMSLLLDELITLRRQNALDYQQYLERIRDLSKQVIRPEQTNGASYPETMDT
QAKRAFYDNFGHDEVLATRIDTTIRYTKKAEWIGDRFKERELARALREETASYNVNIDDV
LELARKQKEYF
NT seq 3096 nt   +upstreamnt  +downstreamnt
ttgagtaccataggccagcgcgaacgcgccacacagcagcgtctgattcagttttttgtt
aaggatttaggataccgctatttggggcggagcgctggatatgccggtgacagcaatatc
gacatggatatattaagcgcatggctgaaacggcgtggcgtcagcgatacgctgattaca
cgtgtgcttcggcaactggattccgccgccgcgctgggcgaaggcaagaagctgtattac
gccaataaagaggtctatcgcctactgcgttacggcgtaaaggaaaaggaaggcgcgggc
gagcagaatcagaccgtgtggctgattgactgggcaaatcctgaagccaatgatttcgcc
atcgccgacgaagtgacggtaaaaggcgaatacagcaagcgcccggacctggtgctgtac
gttaacggcatcgcgctgggcgtgatagaacttaaacgctcgtcagtccacgttagtgaa
ggcatccggcagaatctggataatcagaagaaaacctttatccgcaatttctttaccacc
atgcaactggtgatggcgggtaacgatacgcagggcctgcgctacggcactattgaaacg
ccggaaaaatattatttggaatggaaagaagagcataccgatgcatatacgcataaactc
gactttcatttaagccgtctttgcaacaagtcaaggctgctagatatcgtccataactac
atagcttttgacgttggagtgaaaaaactctgtcgccataatcagttcttcggcgtcgag
gcggctaaacagcatattgctcgtcgtgaaggcgggattatctggcacacgcagggttcg
ggtaaaagcctgacgatggtctggttggcgaagtggatccgcgaaaatgtgccgaattca
cgcgtgctgattgtgaccgaccgcaccgagctggatgaacagatcgaaagcgtgtttatg
ggggtggatgaagagatttatcgcacctctagcggcaacgaccttattgcgacgcttaac
catccgaacccgtggctcatctgctctttggtgcataagtttggtcgtcgtagcgaggcg
gaagacgctgccgcaactgacgacttcatcaccgagttgcaacaatctctgacgaaaacg
ttccgggccaaaggcgacttgtttgtcttcgtggatgagtgccaccgcacgcagtccggc
aagttgcataacgcgatgaccgccattcttccggaagctttgttcatcggttttaccggt
acgccactgatgaagaaagataaaaagaaatcagtggaggtgttcggcccttatatccat
acctacaagtttgatgaggctgtggccgacggggtggtgctggatctgcgctatgaggca
cgcgatattgaccagtatctgacgtctgagaaaaaggtcgatgactggtttgaagccaaa
acgcgtggcctgtcgaacttagccaaaacccagcttaaacagaagtggggctcaatgcag
aaactgctttccagcaagtcacggctggagcagatcgttaatgatattctgttggatatg
gatacccgcccgcggctgatggacgggcgcggcaacgccatgctggtatgcagtagtgtg
tatcaggcttgtaaggtttacgagatgtttagccagacagatctggctggaaaagtggct
attgtaaccagcttccgtcccgatgctgccagtatcaaaggtgaagaaaccggcgcgggc
ctgaccgagaaactttacaaattctcgacctatcgcaaaatgctggctgactattttgaa
caaagcgaagagaagattgctggtcgtatcgccgaattcgagcgagacgttaagcaacgc
tttataaatgaaccggggcaaatgcgtttgcttatcgtggtggataagctgctaaccggc
tttgatgcaccgtctgcgacctatctttatattgataaaaccatgacagaccatacgctg
tttcaggcgatttgtcgggtaaaccggctggacggggaagataaagaatacggctatatt
atcgattataaagatctgttccgctctctggataaagcgataaccgattacaccacgggc
gcgtttgacgattacgatcgcgatgatgttgatgggctgttaaaaaatcgtctggagcag
gcaaagctggatctcgacagcgcgctagaggtagttcgcagcctatgtgaacctgtcaag
gctccgcgcgaattgcaggactatcagcactatttctgtggtcagtcgggtgaaaaccag
acgatattaggcgaaaaagaggcgctgcgcctttcgttctatcagaatgtcgcccgcctg
ctgcgcgtttacgccagcctggcgaatgaaatgcaggaagcgggctataccgatgaggaa
gtggaaagcattcgcgccgaagtcgctaaattcgagagactgcgctacgacattaaactg
accagcggcgatctgctggacatgaagcgctttgagcccgccatgcgccacctgctggat
atgtacgttcgcgccgacggtagcgaagtgcttatggatttcgaagagttaagcctgatt
gagctgattgttgaaaaaggagcagcagcaaccgctgctctgccggacgagatccgcaac
aatcaggatgcgatggcggaaaccatcgaaaacaacgtgcgtaaaaccatcgtggatgaa
aacccggtgaacccaaaatactacgggcgcatgtcgcttttgctggatgaactgattacc
cttcgccgccagaatgcgcttgattatcagcagtatctggaacgtatccgggatttgagc
aagcaggtcatacgcccagaacaaaccaacggagcatcctatcctgaaacaatggatacg
caggcaaagcgcgcgttttatgataacttcggtcatgacgaggtgctggcaacccgtatt
gatacgacaatccgctataccaaaaaagcggagtggattggcgatcgttttaaggaacga
gagcttgcccgtgcactgcgcgaagaaaccgccagttataacgtaaatattgatgacgtt
cttgaacttgcccgcaagcaaaaggaatacttctga

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