Yersinia ruckeri YRB: BD65_3034
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Entry
BD65_3034 CDS
T03611
Symbol
sucD
Name
(GenBank) succinate-CoA ligase, alpha subunit
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
yru
Yersinia ruckeri YRB
Pathway
yru00020
Citrate cycle (TCA cycle)
yru00640
Propanoate metabolism
yru00660
C5-Branched dibasic acid metabolism
yru01100
Metabolic pathways
yru01110
Biosynthesis of secondary metabolites
yru01120
Microbial metabolism in diverse environments
yru01200
Carbon metabolism
Module
yru_M00009
Citrate cycle (TCA cycle, Krebs cycle)
yru_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
yru00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
BD65_3034 (sucD)
00640 Propanoate metabolism
BD65_3034 (sucD)
00660 C5-Branched dibasic acid metabolism
BD65_3034 (sucD)
Enzymes [BR:
yru01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
BD65_3034 (sucD)
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GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
AJI96496
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All DBs
Position
3344816..3345688
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AA seq
290 aa
AA seq
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MSILINKDTKVICQGFTGGQGTFHSEQAIAYGTKMVGGVTPGKGGTEHLGLPVFNTVREA
VETTGATASVIYVPAPFCKDSILEAIDAGIKLIICITEGIPTLDMLVIKVKLEESGVRMI
GPNCPGIITPDECKIGIMPGHIHLAGKVGIVSRSGTLTYEAVKQTTDIGFGQSSCVGIGG
DPIPGSNFIDILKLFEEDPQTEVIVMIGEIGGTAEEEAAAYIKDHVTKPVVGYIAGVTAP
KGKRMGHAGAIIAGGKGTAEDKFAALEAAGVKTVRSLADIGEAVKMVLPQ
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgtctattttaatcaataaagatactaaagttatttgccagggcttcaccggcggtcaa
gggactttccactccgaacaggcgattgcctacggtaccaaaatggttggcggtgtcacg
ccaggcaaaggcggcactgagcatttgggtctgccagtatttaatactgtgcgtgaagcg
gtcgaaacgactggcgcaaccgcctcggtgatctacgttccggctccgttctgtaaagac
tcgattctggaagcgatcgacgctggcattaagctgattatctgtatcactgaaggcatt
cctacattggatatgctggttatcaaggtgaaactggaagaaagcggcgtgcgtatgatc
ggcccgaattgcccaggtattatcacgccagatgaatgtaaaatcggtatcatgccaggc
catattcatttggcgggtaaagtgggtatcgtttcccgttctggtaccctgacttatgaa
gcggtcaagcagacaacggatattggcttcggtcaatcaagctgcgttggtattggtggc
gatccgatccctgggtctaactttatcgatatcctgaaactgttcgaggaagatccacaa
acagaagtgattgtaatgatcggtgagatcggcggtactgcggaagaagaagcggctgcc
tatattaaagatcacgtgaccaaaccggtggtaggttacattgctggcgtaactgcgccg
aaaggcaagcgtatgggtcatgctggcgcaattattgctggtggtaaagggacggcagaa
gacaaatttgctgctctggaagccgctggtgtgaaaacagttcgcagtctggctgatatc
ggtgaagcggtaaaaatggttttacctcagtaa
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